Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211493g00001 ATGGCACCAAACAAGAGAGCCTCATCAAGCGATGAGGGTAATGATGACAGAGACCTTCAACTCCCTCTTTGTAAACGAAAACCAGCACTTCCAGATACCAGTGGTTCCAGCAATGACATGGCGTTGCTCTTGGATTCTGCAATTAAGAAAGCGTTACATGAGACAATACCACCTATGCTACAACAGATGATTCCACCTATTATAGAACAAATGATTCCTCCTATGCTGCAGCGTTACCTATCTTCCCCATGTGATGGATTATCGGTGAAGAGGCAGATTAGTCCACCAGCTGGTGGAGGCAGATCATTGCAGTTATGTCTGATGAAAGGGTTGCCTTCAACCATTTTCACACAGATTAATGTTACAGCAGAGGACAGTTCCCCGCTCCAAATTGCAATCTGTGATGCCACAATTCAGCAACCCAAGTTCCCAAGGGTAGATGGTCCCTGCGTGAAGGTGGAGCTATGCGTGCTGAAGGGTGACTTTGAAACTGAGGATTGGACTTCTGAGGAATTCAATAAGAATATAGAAAGTCCAAGGGACGGAAAAGGACCACTGCTCAAGGGAGAAACGGTTATTGTCGTTAAGAACGGAGTTGGTTGTTTCAAGAAAGTTGAGTTTACAGATAACAGTAGCTGGACAAGAAGCGGCAAGTTCCGGATTGGATTCAGACTAGTTCAATCTAATTCTTCCCAGATTGTAGACATCAAAGAAGGAAGAAGTGAGCCTATAAGGGTGAAGGATAAGAGAGGAGTTGCAAATGAGAAACCGGATCGTCCTTCATTGGATGACAGGGTGAGTTGTCTGCATAAGATAGCGAAAAATGGTCCAATCCGCAAGCAATTGTCCTCCAATGGAATCAAAACCGTGAAGGATCTGTTGCGCTTGCACACAACTGACCAAGCTTCACTAAGACATGTACAGAAAACCTGCAACATTCCGGGGAGATCATGGGAGAAGATTATTGAGCATGCCAAGTCTTGTGAGTTAGATCATGAGGAGCGCTTCGTCTATCAGTATTTCACAGGAACGGCACAGCAACAACCAGCAGCAACACTGATTTTAAATTGCATCTATGAGCCTTTGGAGGTTTCATCTGATGGCCAAAATTTTTACAGCCTAGAGTCTTTGAGTTTGGAAGACAAGCGCTGGGTGGAAAGTATAAAGCAGGAAGCATACAAGAACTTGAAGGATTTGAAGCCATTTAGGGCATGTTCAGAGATGGTAGGTATGCAATGTGGTGCAGCGAATCAATCTCTGGAAAATTTTAATTTCCCAGTTTCTCAGCAAGGGCAAGGGGATATGGTTCAAATTCAAGCATCGGCATCCACAGCATCATATATTGGTGGAGGAGCACAGAGTGTTAGCGAGCAAGTAGGGTGTTCGAGTCAACAAGTAGCAGATCAGCAGGTAACATGGGAAGAGTTTGTTGGTGATAACGGATGTAGCAACATGAGCATGAGTGCAATACAGATTGATGAGTTTCCAAATTACTCCTCGGATCCAGTATATGCACACCCGTTTTACTCTGTTGGAGGTGATTATGGGGCATCATCATCCAACGATTCATTTCATAACTTAGATGTGTGTCATTATTGGTCAAGCAAAGGTGGGTGCAACACTGTGTGGGCTAAATTCAGAAATGCTGTCCTTCGTAATGCTCTTAAATGGGCCATTCTCTATGCCGCTAAAAGGAAGGCCAAGCTTGTTGTCCACTATCACCATTGA 1728 0.4427 MAPNKRASSSDEGNDDRDLQLPLCKRKPALPDTSGSSNDMALLLDSAIKKALHETIPPMLQQMIPPIIEQMIPPMLQRYLSSPCDGLSVKRQISPPAGGGRSLQLCLMKGLPSTIFTQINVTAEDSSPLQIAICDATIQQPKFPRVDGPCVKVELCVLKGDFETEDWTSEEFNKNIESPRDGKGPLLKGETVIVVKNGVGCFKKVEFTDNSSWTRSGKFRIGFRLVQSNSSQIVDIKEGRSEPIRVKDKRGVANEKPDRPSLDDRVSCLHKIAKNGPIRKQLSSNGIKTVKDLLRLHTTDQASLRHVQKTCNIPGRSWEKIIEHAKSCELDHEERFVYQYFTGTAQQQPAATLILNCIYEPLEVSSDGQNFYSLESLSLEDKRWVESIKQEAYKNLKDLKPFRACSEMVGMQCGAANQSLENFNFPVSQQGQGDMVQIQASASTASYIGGGAQSVSEQVGCSSQQVADQQVTWEEFVGDNGCSNMSMSAIQIDEFPNYSSDPVYAHPFYSVGGDYGASSSNDSFHNLDVCHYWSSKGGCNTVWAKFRNAVLRNALKWAILYAAKRKAKLVVHYHH 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211493g00001 575 PANTHER OS02G0177800 PROTEIN 55 469 IPR012416 GO:0005516
Stsc211493g00001 575 Pfam Calmodulin binding protein-like N-terminal domain 103 249 IPR046831 -
Stsc211493g00001 575 Pfam Calmodulin binding protein central domain 262 328 IPR046830 -
Stsc211493g00001 575 Pfam Calmodulin binding protein C-terminal domain 347 401 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211493g00001 Stsc-Chr211493 1852 4839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211493g00001 60 399 Calmodulin-binding Proteins AT5G26920 37.026 8.27e-59 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211493g00001 - - aip:107645943 775.393