Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211492g00014 ATGATCGCGAGGGGAGTTCCAGGCCGGTCAGGGAAGTCATGCCGGCTCCGATGGTGTAACCAACTCGACCCTTGTGTTAAACGCAAGCCTTTCACTGGATTTGACCAAGATAACTTCATACTCCCTGTGTCTAGTCTTGGGATTAAAGGAAGTGTGAGTAAGAGAGAAAAGCGGAACCGAAGATCTATCTGCCATGAACAAGAGCAAAAAAAGACATTAATTGTCATCTTAGATGTTAAGAGGGAAACATAA 252 0.4484 MIARGVPGRSGKSCRLRWCNQLDPCVKRKPFTGFDQDNFILPVSSLGIKGSVSKREKRNRRSICHEQEQKKTLIVILDVKRET 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211492g00014 83 SUPERFAMILY Homeodomain-like 1 49 IPR009057 -
Stsc211492g00014 83 Gene3D - 1 27 - -
Stsc211492g00014 83 CDD SANT 2 20 IPR001005 -
Stsc211492g00014 83 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 26 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211492g00014 Stsc-Chr211492 129300 131206 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211492g00014 1 46 MYB Transcription Factor Family AT3G55730 65.217 2.12e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211492g00014 K09422 - ghi:107925921 76.6405