Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211491g00004 ATGGAAGAAGGGAAAGAGAAGGGTGTGTTTGATGGAGAGAAGGCTTGTTTGTTAGTTAAAGAACTTAGAAAGAGCTTTGAATCAGGGAAGACAAGAAGCTACAAATGGAGGATTTCACAGTTGGAAGCCATAGCTATGATGATACAAGAAAGGGAGAAGGACATCATTGAAGCAGTATATAAGGACCTTTCTAAACCTCAACTTGAAGCTTACATAAGTGAGGTTTCTCGTATAAAAACCGCATGTAGTGAAGCAATTAAAGCATTGCATCAATGGATGAAGCCTGAAAAGGTGAAAACTGGGATTACAACATATCCATCATCAGCAGAGATAGTGTCTGAACCACTTGGAGTTGTGCTCGTAATTTCAACATGGAACTTCCCTTTCATGATATCTCTGGAGCCGGTCATCGGAGCGATTGCGGCGGGAAATGCGGTGGTCCTGAAACCATCAGAAGTTGCTCCGGCATCATCAGCATTGCTTGCAGATTTGGTGGAAAATTATTTGGACAACTCTTCTGTTAGAGTTATTGAAGGGGGCGTTCCTGAAGCAACTGCACTATTGGAGCAGAAATGGGATAAGATATTATACACAGGTAATGCAAGAGTAGGGCGCATTGTGATGGCTGCTGCTACAAAGCATCTTACACCTGTAATTCTGGAACTTGGAGGAAAGTGCCCTGCTCTTGTTGATTCTAATCTCAACTTGCAAGTTGCTGTTAGAAGATTAATAGCTGGAAAATGGGCAATCAACAGTGGACAAGCATGCGTTTCTGTTGATTATATCATCACTCTAAAAGAATTTGCTCCAACACTTATAAATGCTATGAAGGAGGAATTGGAGCAATTTTTCGGAAAAGATCAGATCAAATCGAAAGACATGTCGCGAATCGTGTCTCCATCGCACTTTTCGCGGCTCTCAAAACTCTTGGATGATGACAAAGTATCTGATAAAATTGTTTTAAGAGGTCAAATAGATGAGAATCAATTAAAGATTGCTCCAACAATTATATTGGATGCGCCAGATGATTCTTTGGTGATGCAAGAGGAGATATTTGGGCCAATAATGCCAATTGTGACTGTTGATAAGATAGAAGATGGGTTTGATATAATAAAATCAAAACCAAAACCACTTGCTGCATATCTCTTCACAAACAATGAACAGCTGAAGAAAAGTTTTGTGGAGAACATTTCTTCCGGAGGGATGCTCATCAATGACACTGTCTTACATGTTGTAACCGCTGGTTTGCCATTTGGAGGAGTTGGAGAGAGTGGAATGGGTTGCTACCATGGAAAATTCTCTTTTGATGGTTTCAGCCATAAGAAAGGGGTTCTCTATAGAAGTTTCAATGCTTGGTTTGGTAGTAGTAATAGTAATAAGCATAAAAGTATTAGTTCCAATTATGGAACTGGAAGAAGAAACTCTGCTCCTCTTGATGAACCTTCTTCCTCTTCATCGTCCTCTTCCTCCTCGTGGTCGTCATCGTTGTTGCTTAATCAGTATCATGCTAGCTCATCCGTCGTGTTTCGGGTTCACGGCAACGTTTATCCCGTTGGGTTCTATAATGTAACAGTGAACATAGGGCACCCACCAAGGCCTTATTACCTTGATATTGATACTGGCAGTGACCTCACATGGCTTCAATGTGATGCCCCTTGTACTCATTGCACTCAGACGCCGCATCCGCTGTACCGGCCAAGCAATGACTTGGTGGCATGTAGGGATCCAATGTGTGCATCATTGCATCAGAATGAAGTGTATGAATGTGAACAGCCACACCAATGTGACTATGAAGTTGAGTATGCAGATCAGTACTCTTCCCTTGGTGTTCTTGTGAATGATGTGTACCTTCTAAACTTCACCAATGGAAACCAACTCAGAGTTAGAATGGCACTTGGATGTGGATATGATCAGCTATTTCAAGACCATTCCTACCACCCTTTGGATGGAATGCTTGGACTTGGAAGGGGAAGATCAAGCTTGGTTTCACAGCTCAATAGCCAGGGTTTGGTTAGAAATGTGTTTGGACATTGCTTGAGTTCACAAGGGGGAGGCTATATCTATTTTGGTGATGTTTTTGACTCTTCTAGACTCACTTGGACTCCAATGTCATCCACACATTACAAACATTACTCAGCTGGGCCAGCTGAACTCCTTTTGGGAGGAAAGAGAACTGGGATTGGAAATCTCAATGCTGTTTTTGACACTGGAAGTTCTTACACTTACTTCAACTCCATGGCTTACCAAGCAGCAATTTCTTGGTTGGAAAAGGAGTTAGCTGGGAAGCCTATAAAACAATCACATGATGATGAAACTCTCCCTCAATGCTGGCATGGTAGAAGACCTTTCAGAAGCATACATGAAGTCAGAAAATACTTCAAGCCTATGTCTCTTACTTTCGCCGGCGGCCGGAGTAAAGCTCAGTTCGAAATCCCTCCTGAGGCATACCTCATAATATCAAACATGGGAAATGTTTGCTTGGGAATCTTAAATGGATCTGAAGTAGGGATGGGAGATCTAAACCTAATTGGAGACATATCCATGCAAGACAAAGTGATGGCGTTTGACAATGAGAAGATCATGATTGGTTGGGCACTAGCAGACTGTGACAGAGTCCCCAAATCAAGACATGCCAACATTTGA 2643 0.4207 MEEGKEKGVFDGEKACLLVKELRKSFESGKTRSYKWRISQLEAIAMMIQEREKDIIEAVYKDLSKPQLEAYISEVSRIKTACSEAIKALHQWMKPEKVKTGITTYPSSAEIVSEPLGVVLVISTWNFPFMISLEPVIGAIAAGNAVVLKPSEVAPASSALLADLVENYLDNSSVRVIEGGVPEATALLEQKWDKILYTGNARVGRIVMAAATKHLTPVILELGGKCPALVDSNLNLQVAVRRLIAGKWAINSGQACVSVDYIITLKEFAPTLINAMKEELEQFFGKDQIKSKDMSRIVSPSHFSRLSKLLDDDKVSDKIVLRGQIDENQLKIAPTIILDAPDDSLVMQEEIFGPIMPIVTVDKIEDGFDIIKSKPKPLAAYLFTNNEQLKKSFVENISSGGMLINDTVLHVVTAGLPFGGVGESGMGCYHGKFSFDGFSHKKGVLYRSFNAWFGSSNSNKHKSISSNYGTGRRNSAPLDEPSSSSSSSSSSWSSSLLLNQYHASSSVVFRVHGNVYPVGFYNVTVNIGHPPRPYYLDIDTGSDLTWLQCDAPCTHCTQTPHPLYRPSNDLVACRDPMCASLHQNEVYECEQPHQCDYEVEYADQYSSLGVLVNDVYLLNFTNGNQLRVRMALGCGYDQLFQDHSYHPLDGMLGLGRGRSSLVSQLNSQGLVRNVFGHCLSSQGGGYIYFGDVFDSSRLTWTPMSSTHYKHYSAGPAELLLGGKRTGIGNLNAVFDTGSSYTYFNSMAYQAAISWLEKELAGKPIKQSHDDETLPQCWHGRRPFRSIHEVRKYFKPMSLTFAGGRSKAQFEIPPEAYLIISNMGNVCLGILNGSEVGMGDLNLIGDISMQDKVMAFDNEKIMIGWALADCDRVPKSRHANI 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211491g00004 880 FunFam Aldehyde dehydrogenase 224 424 - -
Stsc211491g00004 880 MobiDBLite consensus disorder prediction 459 490 - -
Stsc211491g00004 880 Pfam Xylanase inhibitor C-terminal 728 864 IPR032799 -
Stsc211491g00004 880 Pfam Xylanase inhibitor N-terminal 521 691 IPR032861 -
Stsc211491g00004 880 SUPERFAMILY ALDH-like 19 451 IPR016161 GO:0016491
Stsc211491g00004 880 Gene3D Acid Proteases 497 690 IPR021109 -
Stsc211491g00004 880 SUPERFAMILY Acid proteases 513 872 IPR021109 -
Stsc211491g00004 880 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 23 442 IPR016162 GO:0016491
Stsc211491g00004 880 ProSiteProfiles Peptidase family A1 domain profile. 521 865 IPR033121 -
Stsc211491g00004 880 FunFam Aspartyl protease family protein 498 691 - -
Stsc211491g00004 880 Gene3D Acid Proteases 691 873 IPR021109 -
Stsc211491g00004 880 FunFam Aspartic proteinase Asp1 isoform A 694 873 - -
Stsc211491g00004 880 FunFam Aldehyde dehydrogenase 23 227 - -
Stsc211491g00004 880 PANTHER ALDEHYDE DEHYDROGENASE 18 451 IPR012394 GO:0006081
Stsc211491g00004 880 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 224 424 IPR016163 GO:0016620
Stsc211491g00004 880 Pfam Aldehyde dehydrogenase family 19 442 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211491g00004 Stsc-Chr211491 21364 30295 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211491g00004 10 450 Aldehyde Dehydrogenase Gene Family AT4G34240 68.254 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211491g00004 K00128 - gmx:100800699 694.886