Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211490g00022 ATGAATGAAAAAATGGACAACAATATTTGGATTGTGTTTGTGACACCATTGCTCTTGTTCTCCACTTTGATCCTCATCCTCTTCTACAGAAGGATCACATGGCTTAGACTCATCAAATCCAAACACATGAATCAACTTCCCTTAGGCACTCTTGGATGGCCCTTTCTTGGTGAAACCATTGAGTTTATTTCCTGTGCCTACTCTGATCATCCTGAGAGCTTCATGGACAAGCGTCGCAGCATGTATGGGAAGGTGTTTAAGTCACACATATTTGGGAGCCCCACAGTTGTGTCCACAGATGCAGAAGTTAATAGGTTCATTCTGCAAAGTGATGCAAAGGCTTTTGTTCCTTCATATCCAAAGTCTCTGACTGAGTTGATGGGGAAGTCTTCCATTTTGCTCATCAATGGAAGCCTGCAGAGGAGAATACATGGACTAGTTGGAGCTTTCTTCAAGTCTCAGCAGCTTAAGGTTCAGATCACTAGAGAGATGCAGAACTATGTCCAAGAATCAATGGCTAATTGGAAAGAGGATCAACCAGTGTACATACAAGATGAGACCAAAAATATTGCATTTCAAGTACTAGTCAAGGCATTGATTAGTTTGGATCCTGGTGAAGAAATGGAGCTTCTGAAGAAACATTTTCAGGAATTCATGTCTGGTCTCATGTCTCTACCAATAAACTTGCCAGGAACTAAACTTCATCAATCCTTACAGGCAAAAAAGAAGATGGTGAAGTTAATGCTGAGAACTATTGAATGTAGAAGAGAAGATGGAATCTCCAAAGTTCCAAAGGATGTAGTGGATGTGCTTCTGAATGATGAAAATGATATGTTAACAGATGAATTAATAGCAGATAATATGATTGATATGATGATTCCAGGAGAGGATTCTGTCCCAGTTCTTATGACTCTTGCTGTAAAGTATTTATCAGAATGCCCTACTGCTTTGCAACAATTAACGGAGGAGAATGTGAAGCTTAAGAAACTCAAGGATCAGCTTGGGGAGCCCTTGTGTTGGAGTGATTACTTATCATTACCATTTACTCAAACAGTTATTACAGAAACTTTGAGGTTAGGTAATGTAATAATTGGAGTTATGAGAAAGGCTATGAAAGATGTAGAAATTAAAGGGTATTTTATACCAAAAGGGTGGTGTGTTTTTGCATATTTTAGATCAATTCATCTAGATGACAAAAACTATGACAAGCCTTACCAATTCAATCCATGGAGGTGGCAAGATAAAGACACAAGCAGTTGCAATTTCACTCCTTTTGGAGGTGGACAGAGATTGTGCCCTGGCCTTGACTTGGCAAGGCTTGAGGCTTCTATCTTCCTACATCACTTGGTCACTCAATTCAGGTGGTATGCAGAAGAAGATACAATTGTGAATTTCCCCACTGTAAGAATGAAAAGAAGGATGCCAATCTTGATTAGAAGAGTGGAATCTTAG 1452 0.3939 MNEKMDNNIWIVFVTPLLLFSTLILILFYRRITWLRLIKSKHMNQLPLGTLGWPFLGETIEFISCAYSDHPESFMDKRRSMYGKVFKSHIFGSPTVVSTDAEVNRFILQSDAKAFVPSYPKSLTELMGKSSILLINGSLQRRIHGLVGAFFKSQQLKVQITREMQNYVQESMANWKEDQPVYIQDETKNIAFQVLVKALISLDPGEEMELLKKHFQEFMSGLMSLPINLPGTKLHQSLQAKKKMVKLMLRTIECRREDGISKVPKDVVDVLLNDENDMLTDELIADNMIDMMIPGEDSVPVLMTLAVKYLSECPTALQQLTEENVKLKKLKDQLGEPLCWSDYLSLPFTQTVITETLRLGNVIIGVMRKAMKDVEIKGYFIPKGWCVFAYFRSIHLDDKNYDKPYQFNPWRWQDKDTSSCNFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFRWYAEEDTIVNFPTVRMKRRMPILIRRVES 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211490g00022 483 Pfam Cytochrome P450 47 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211490g00022 483 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211490g00022 483 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211490g00022 483 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211490g00022 483 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211490g00022 483 PRINTS E-class P450 group I signature 79 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211490g00022 483 Gene3D Cytochrome P450 37 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211490g00022 483 PANTHER CYTOCHROME P450 26 44 456 - -
Stsc211490g00022 483 CDD CYP90-like 78 480 - -
Stsc211490g00022 483 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
Stsc211490g00022 483 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 36 481 - -
Stsc211490g00022 483 SUPERFAMILY Cytochrome P450 43 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211490g00022 Stsc-Chr211490 123912 128578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211490g00022 42 454 Cytochrome P450 AT3G13730 68.810 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211490g00022 K12638 - gmx:100782687 788.875