Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211490g00012 ATGGGGTTGCAGCTGATATTCATGTTAATAATCAAGCTAAATTTAGTTCTATGTATTCCACAGCTTCATCAATATGCAGCAACAAATCTGCACCATTATAGGGTCAGAAGCCATTCAAGTATTGCATTGCCTCCATCAGAGTCATCATATTCTGCAGTTTCACCATCCAAATCATTCTCCAAAGCTCCTACAAAGAAGTGGATTCATGGTTATGTGGATTCTCCGATATCACATCATAAGCACCACAACTACAAAAGGAAGTTTAGAAACCAAACTCCTCAGCCAAACAATCTTCATACTCATCAAGGTACTTCAGTCTTCAAATCACAACCTAAAAGATGGAATTCTGCTGCTCCTTCACCATCACCATCAGTTCTATCAAATCACTTGAATGTGCCCTCTCCCTCCCCAAGAATTTCACCTCTAGCTTCATCATTGAATAAGATAAAGACTCCACCACCAGCATATGCTTTGGTTCTGCCACCTCCACCACCTAATAAGGACTGCATGATGATGACTTGCTCAGAGCCATTGACAAATACACCTCCTGGATCACCTTGTGGTTGTGTGTGGCCACTTCAAGTTAAAATCCGCATGAGCATTGCAATATACAAGTTCTTTCCATTGGTTTTCGAGCTAGCTGAGGAAATCGCAGCGAGTCTTTTGTTGGACTGCAACCAGGTTCGCATTGTTGGAGCTGATGCAGCAAATCATCAACTAGAGAAAACCACTGTTCTCTTAAATTTGGTACCTCAAGGAGTTAAGTTTGATGATACAACAGCTTTCTTGATATACAAGAAATTCTGGCACAGGGAACTTCTCACTGATGCTTCCCTTTTTGGTGCCTATGAAGTACTCTATGTTCATTATCCAGGTCTTCCACCATCTCCACCTTCAAATCCTTTTGATGTTTCTGGTATAGTTGAGCCAGATTCTGTTGGTACTGATGGGAATTTGATAAAGCCTTTAGGAGTTGATGTCTCTAATAAGAAGAAAAAAGAAGGGAATGGCGAAAGAACGGTTGTTATGGTCATGCTGTCATGTTTTGCAGCTTCTGTTCTCTTCATTGGAGTTACTTGGCTTTGTCTATTGAAATGCCATTATCCTGTCCTTGAAACTGAACAACTTCCAGATGTTAAAACTGCACACTCTTTCAAAAATTCAGGCACTGCTAGGTCATTGCCTTATGAGAACATGCTGAATTCTAGATCAACCTCAACCAATTCTGGAACAATAGCATATGCAGGATCAGCTAAGATATTCACTTTGAATGAAATAGAGAAAGCAACAAATAGCTTCAGTTCTTCAAGAATATTAGGAGAAGGTGGCTTTGGCCTTGTTTACAAAGGAGGCCTACATGATGGAAGGGATGTTGCAGTCAAGATTCTCAAAAGGGATGATCGGCATGGTAGCCGCGAATTTTTGGCCGAAGTTGAGATGCTTAGCCGTCTGCACCATAGAAATTTAGTTAAACTGATAGGTATATGCATTGAGAAACCGAGTCGTTGCCTTGTCTATGAGCTTGTGCCTAATGGAAGTGTAGAATCCCATTTACATGGTTCAGACAAGGTAACAGGTCCACTTGATTGGGATGCAAGGATGAAGATTGCACTCGGCGCTGCTCGAGGATTGGCTTATCTGCATGAAGATTCAAATCCATGTGTCATACATAGAGACTTCAAGTCCAGCAACATCTTGTTGGAAGATGACTTCACACCCAAGGTATCAGATTTCGGATTGGCTAGAACAGCACTTGATGAGGGAAACCAGCATATATCCACACATGTTATGGGGACATTTGGGTATCTAGCTCCTGAATATGCAATGACAGGACATCTTCTTGTGAAAAGTGATGTTTACAGCTATGGAGTAGTGCTCCTAGAGCTCCTAACAGGGAGAAAGCCTGTGGACTGGTCGCGACCACCCGGTCAAGAATGCCTTGTTGCTTGGGTTCGTCCGCTTCTCACGAGTAAGGAAGGTTTGGAGATGATCATAGACCCAGATATAAAGCACAGCATTTCTCTTGACAGCGTGCTAAAAGTCGCAGCGATTGCATCCATGTGTGTGCAAGCAGAAGTCACTCAACGCCCTTTCATGGGTGAAGTTGTGCAGGCCTTGAAGCTGGTATACAGTGAGTTTGAGGAAACAACAGGCTATGGAAGATCAGTGAGTTTTCGAGATGATGTACAGGGGAAGTTTTCCAAATGTTCAGATGAGAGAGTGGATTTTTCAGTGTAA 2238 0.4236 MGLQLIFMLIIKLNLVLCIPQLHQYAATNLHHYRVRSHSSIALPPSESSYSAVSPSKSFSKAPTKKWIHGYVDSPISHHKHHNYKRKFRNQTPQPNNLHTHQGTSVFKSQPKRWNSAAPSPSPSVLSNHLNVPSPSPRISPLASSLNKIKTPPPAYALVLPPPPPNKDCMMMTCSEPLTNTPPGSPCGCVWPLQVKIRMSIAIYKFFPLVFELAEEIAASLLLDCNQVRIVGADAANHQLEKTTVLLNLVPQGVKFDDTTAFLIYKKFWHRELLTDASLFGAYEVLYVHYPGLPPSPPSNPFDVSGIVEPDSVGTDGNLIKPLGVDVSNKKKKEGNGERTVVMVMLSCFAASVLFIGVTWLCLLKCHYPVLETEQLPDVKTAHSFKNSGTARSLPYENMLNSRSTSTNSGTIAYAGSAKIFTLNEIEKATNSFSSSRILGEGGFGLVYKGGLHDGRDVAVKILKRDDRHGSREFLAEVEMLSRLHHRNLVKLIGICIEKPSRCLVYELVPNGSVESHLHGSDKVTGPLDWDARMKIALGAARGLAYLHEDSNPCVIHRDFKSSNILLEDDFTPKVSDFGLARTALDEGNQHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDWSRPPGQECLVAWVRPLLTSKEGLEMIIDPDIKHSISLDSVLKVAAIASMCVQAEVTQRPFMGEVVQALKLVYSEFEETTGYGRSVSFRDDVQGKFSKCSDERVDFSV 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211490g00012 745 FunFam Receptor-like serine/threonine-protein kinase ALE2 509 723 - -
Stsc211490g00012 745 MobiDBLite consensus disorder prediction 78 132 - -
Stsc211490g00012 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 555 567 IPR008271 GO:0004672|GO:0006468
Stsc211490g00012 745 MobiDBLite consensus disorder prediction 89 132 - -
Stsc211490g00012 745 SUPERFAMILY Protein kinase-like (PK-like) 408 706 IPR011009 -
Stsc211490g00012 745 ProSitePatterns Protein kinases ATP-binding region signature. 439 461 IPR017441 GO:0005524
Stsc211490g00012 745 FunFam receptor-like serine/threonine-protein kinase ALE2 406 508 - -
Stsc211490g00012 745 PANTHER OS01G0750732 PROTEIN 161 724 - -
Stsc211490g00012 745 CDD STKc_IRAK 439 707 - -
Stsc211490g00012 745 Gene3D Phosphorylase Kinase; domain 1 404 508 - -
Stsc211490g00012 745 Gene3D Transferase(Phosphotransferase) domain 1 509 723 - -
Stsc211490g00012 745 ProSiteProfiles Protein kinase domain profile. 433 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211490g00012 745 Pfam Protein tyrosine and serine/threonine kinase 436 706 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211490g00012 Stsc-Chr211490 66816 70055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211490g00012 166 738 Receptor kinase-like Gene Family AT5G56890 60.922 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Stsc211490g00012 PK_Tyr_Ser-Thr 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211490g00012 - - gmx:100814040 1008.44