Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211490g00010 ATGGCAACAAAGGATTCTTCATCTTCCTCCGAATTAGAATCACCAAGAAGACTCCAATATCCGTTGGACCCTAATTCATACAAGATCCTCGACGAGATTGGTTCCGGCGTCAGCGCCGTCGTCTACAAGGCTATCTGCATTCCCATGAACTCCTCACTCGTCGCCATCAAATCCATCGACCTCGACGGATCTCGCCCCGACTTCGACGACGTCCGCCACGAAGTCAAGACACTATCCCTCCTCTCCCACCCTAACATCCTTAACGCACACTGTTGCTTCACTGTAGAGCACCGTCTCTGGTTAGTCATGCCGTTCATGGCCGGCGGATCTTTCCAATCCATCATCTCTCATTCCTTCCCGGACGGATTCTCAGAGCCATGCATCGCATTCATCCTCAGAGAAACTCTCAACGCTTTATCCTATCTCCATAGCCAAGGACATCTCCACAGAGACATCAAAGCCGGTAACATTCTTGTGGACTCCAACGGATCGGTAAAGCTCGCTGATTTCGGAGTCTCCGCTTCGATTTACGAGTCAATCATGAGCTCCTCTTCATCATCTTCTTCTTTACAAGATCTGGACAAGTTTGGTGGCGGGTCCCACAGCGCCAAGAAATTCTCCAAGAGCTTCAAGGACATGGTGGCTTCTTGCTTGGATCAGGATCCGTCTAAGAGGCCTACGGCGGAGAAGCTTCTGAAGCATCCGTTCTTTAGGAACTGTAAGGGATCTGAGTTTTTGGTGAAGAACGTGCTTCAAGGGTTGCCCAGTGTTGAGAAAAGGTACAAGGTAATCAGCAAGGCTTCCATGAATAATAGTAGTAATAATAATAATAATGCAACTATTCCGAAGGTGGATGAAGATGACGACGACGACGGCGATGACGAGGACCATGCAGTGAAGCATGGGAAGGTGATGAAGCAAAGAAGGATAAGTGGGTGGAATTTCAATGAAGATGGATTGGAACTTGAACCTGTTTTTCCAAATGATGAAGTAGAAGATGATGAGTCATCAAAAGGAACAAGCATGAAGAATGCAACAAAAGGAGGTGATGAAGGTGAACATGAGAATGAGAATGAAAGGTTAAAGGGTATTGAAGGAGTAGCCATGAATGTGAACAACCGTGATGCGATGCTGGCAACACTGAATGTGCTTAAAGGAAGCTTGGAACAAGAGCTTGGACAAGTGAAGGCTTTGATGAACATCATTCGTGGAGATCGTAATCATGATCATGATCATGATCAGGACAACAAGCAGCAGTTGGAGTCACAGCTAGACACCTTGAAGCTTCATCAATTTTCTTGA 1302 0.4654 MATKDSSSSSELESPRRLQYPLDPNSYKILDEIGSGVSAVVYKAICIPMNSSLVAIKSIDLDGSRPDFDDVRHEVKTLSLLSHPNILNAHCCFTVEHRLWLVMPFMAGGSFQSIISHSFPDGFSEPCIAFILRETLNALSYLHSQGHLHRDIKAGNILVDSNGSVKLADFGVSASIYESIMSSSSSSSSLQDLDKFGGGSHSAKKFSKSFKDMVASCLDQDPSKRPTAEKLLKHPFFRNCKGSEFLVKNVLQGLPSVEKRYKVISKASMNNSSNNNNNATIPKVDEDDDDDGDDEDHAVKHGKVMKQRRISGWNFNEDGLELEPVFPNDEVEDDESSKGTSMKNATKGGDEGEHENENERLKGIEGVAMNVNNRDAMLATLNVLKGSLEQELGQVKALMNIIRGDRNHDHDHDQDNKQQLESQLDTLKLHQFS 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211490g00010 433 Gene3D Phosphorylase Kinase; domain 1 16 105 - -
Stsc211490g00010 433 Gene3D Transferase(Phosphotransferase) domain 1 190 291 - -
Stsc211490g00010 433 MobiDBLite consensus disorder prediction 268 304 - -
Stsc211490g00010 433 MobiDBLite consensus disorder prediction 329 357 - -
Stsc211490g00010 433 SUPERFAMILY Protein kinase-like (PK-like) 10 258 IPR011009 -
Stsc211490g00010 433 SMART serkin_6 27 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211490g00010 433 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 19 185 IPR047173 GO:0043539
Stsc211490g00010 433 FunFam Serine/threonine-protein kinase BLUS1 16 105 - -
Stsc211490g00010 433 ProSitePatterns Protein kinases ATP-binding region signature. 33 57 IPR017441 GO:0005524
Stsc211490g00010 433 ProSiteProfiles Protein kinase domain profile. 27 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211490g00010 433 Gene3D Transferase(Phosphotransferase) domain 1 107 189 - -
Stsc211490g00010 433 Pfam Protein kinase domain 27 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211490g00010 Stsc-Chr211490 54115 56001 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211490g00010 12 337 MAP Kinase Kinase Kinase Kinase AT5G14720 40.212 1.52e-87 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Stsc211490g00010 Pkinase 4.8e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211490g00010 K08835 - adu:107461391 329.717