Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211490g00009 ATGAGCAAAAGAAACACCACCACAACCTCATCCTCAACCTCACACTCACAGGCTTGTGCTGCTTGTAAGCACCAACGTAGGAAGTGTGGTCCTAACTGTATTCTCGCACCATATTTTCCTCACGATCGGCAAAAACAATTCCTTAATGCTCATAAATTGTTTGGTGTTGGCAGAATGACTGATCTCATTAAACCCCTTAATCCTTCTGACAGAAACATTGCCATGGAAACCATCATCTACCAAGCTGAGATGCGAGCCTATGATCCTGTCGGTGGTTGTTTTAGGTTAATACAACATCTTCAGTCTCAGATTGAGTATTATCAAGCTGAGCTTCAACTTGTTCTTCACCATCTCGCCCTCTTCAAAGCTCAAGCGCAGCAGCAATCTTTAGATGGTAATCATTCTAATAATGTTGAAGGAGGGATTCAACAGGATCAATATTATGAAGCTACTAATATGGATAGCAATAATAGTTCAACCATTACTCAAGAAGTGGATCTTAACGCATGGATGATGCAAAACTTGCAAACACCTGGGTTGTTATCACCTTTGGCATTAAACAACGAGAATGAAAATGAGAATATTAGAGTTCTTGATGATAATAATGGCTATGTTTATGATCCGAAGCCTATGGTTGACCTTGGTTTTAAAGAAACGAATTCAGATCATCAAACACTAGTTGAGGGCATGCATTCAGGGATGAAGCTAATTTAA 714 0.3964 MSKRNTTTTSSSTSHSQACAACKHQRRKCGPNCILAPYFPHDRQKQFLNAHKLFGVGRMTDLIKPLNPSDRNIAMETIIYQAEMRAYDPVGGCFRLIQHLQSQIEYYQAELQLVLHHLALFKAQAQQQSLDGNHSNNVEGGIQQDQYYEATNMDSNNSSTITQEVDLNAWMMQNLQTPGLLSPLALNNENENENIRVLDDNNGYVYDPKPMVDLGFKETNSDHQTLVEGMHSGMKLI 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211490g00009 237 ProSiteProfiles LOB domain profile. 17 118 IPR004883 -
Stsc211490g00009 237 Pfam Lateral organ boundaries (LOB) domain 18 114 IPR004883 -
Stsc211490g00009 237 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 16 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211490g00009 Stsc-Chr211490 52784 53692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211490g00009 17 168 AS2 family AT3G13850 50.000 1.27e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc211490g00009 LOB 6.1e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211490g00009 - - adu:107461308 345.895