Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211489g00037 ATGGTTTCTGATGGGCTGATATGTGACCATTGCTGCAGTCTATTGTTGCGTCGTGAGTGTTGTTCATTCAGCAATGGGGAATATGTAAAGACAGGCTTGGCTGAATTAGAGCTGTGGTGTGTGGATGCTACCGAAGAGTATACTGGCTCGGCTTGGGAGGAACTGAAACATATCAGGCAGGCTGTTGGATTCTTGGTGATACATCAAAAACCCAGAAAGTCCTTGAATGAAATAACGAAGGAGCTTTGCCCTGTTCTCAGTATACAACAGTTATACAGGATAAGTACCATGTATTGGGATGACAAGTACGGCACGCACAGTGTATCTTCGGACGTCATAACAAGCATGAGAACTATGATGTCCGAGGACTCTAATAACGCTGTCAGCACTTCTTTCCTATTAGATGATGACTCGAGTTGCTTTGGGGAATTTGTCCATTTCTCAAGCGCGATTGATAATAGGGGACGGTGTGATGGATATCTTTTGTCTGATATTTCACTTTTCTTGTTGTCCGAAATGCCAGGGACCAGGGAGGCCATTTTGTAA 546 0.4414 MVSDGLICDHCCSLLLRRECCSFSNGEYVKTGLAELELWCVDATEEYTGSAWEELKHIRQAVGFLVIHQKPRKSLNEITKELCPVLSIQQLYRISTMYWDDKYGTHSVSSDVITSMRTMMSEDSNNAVSTSFLLDDDSSCFGEFVHFSSAIDNRGRCDGYLLSDISLFLLSEMPGTREAIL 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211489g00037 181 ProSiteProfiles Dilute domain profile. 1 122 IPR002710 -
Stsc211489g00037 181 PANTHER DILUTE DOMAIN-CONTAINING PROTEIN YPR089W 13 139 - -
Stsc211489g00037 181 SMART DIL_2 6 104 IPR002710 -
Stsc211489g00037 181 Pfam DIL domain 13 101 IPR002710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211489g00037 Stsc-Chr211489 136898 138660 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211489g00037 13 139 Myosins gene family AT5G20490 86.614 2.13e-76 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211489g00037 K10357 - gmx:100777802 249.98