Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211489g00029 ATGCTTACATGCATAGCACGTCCCAAGAAATCGGGCAACCACGAGTCTCCGAGTAAGCCTGATGATTCCGATCCCAACAACAAAAACCAGTCCATGAAATCCCTCACTTCTCAGATAAAGGACATGGCGCTGAAGGCGTCGGGAGCGTACAAGCATTGCGCGCCGTGCACGGCGGCGGGACCTGCGGGGAGACACATGAGGAGCAACGGGGAGTCGTCGCCGGAGACGGAATCAGACAGGTTCAGGTGGTCGTACCGGAGGACGGGGAGCTCGACGAGAGGTTGGGGAAAGGAGATGGAGGCGAGGCTGAAGGGGATATCATCGTCGAGTGGGGAAGGCACGCCGAACTCCGCCAGCGGACGGCGGTTGGATCCGGTTGTTCTGTTCGTCGAAGAGAACGAACCAAAGGAGTGGGTGGCGAACGTCGAGCCCGGCGTTTTGATCACCTTCGTATCGCTTCCACGTGGCGGCAACGATCTCAAGCGCATTCGTTTCAGCCGCGAGATGTTTAGCAAATGGCAAGCTCAAAGGTGGTGGGCGGAGAATTATGACAGGGTAATGGAACTTTACAATGTTCAAAGGCTTAACCGTCAAGCATTCCCTCTTCCAACGCCACCAAAATCCGAAGATGAGAACTCAAAGCTTGAATCAGCAGAAGAGAGCCCAGTAACACCACCACTAAGCAGGGAAAGATTACCTCGCAATTTGCACCGTCCAACAGGTATGGGAATGGGATACTCATCCTCGGATTCCTTCGATCATCAGTCCGTGCAATCCCAATCCCGCAAGTTGCATGACTTAAATGGTGTTAACTCAACTCCAAAGGTCTCGACCATTAGTGCTGCCAAGACCGAGATATCATCAATGGATGCTTCAATCAGAAGTAGCTCATCTAGAGAGGCGGATCGATCAGGTGATCTATCAATCAGCAATGCTAGTGATTTGGACTCTGAATGGGTTGAGCAAGATGAACCTGGGGTTTATATTACCATCAGAGCATTGCCAGGTGGCAAAAGGGAGCTCAGACGAGTCAGATTTAGCCGAGAAAAATTTGGGGAGGTGCATGCTAGATTGTGGTGGGAGGAGAATCGTGGCAGAATACATGAACAATACTTGTGA 1119 0.5183 MLTCIARPKKSGNHESPSKPDDSDPNNKNQSMKSLTSQIKDMALKASGAYKHCAPCTAAGPAGRHMRSNGESSPETESDRFRWSYRRTGSSTRGWGKEMEARLKGISSSSGEGTPNSASGRRLDPVVLFVEENEPKEWVANVEPGVLITFVSLPRGGNDLKRIRFSREMFSKWQAQRWWAENYDRVMELYNVQRLNRQAFPLPTPPKSEDENSKLESAEESPVTPPLSRERLPRNLHRPTGMGMGYSSSDSFDHQSVQSQSRKLHDLNGVNSTPKVSTISAAKTEISSMDASIRSSSSREADRSGDLSISNASDLDSEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEVHARLWWEENRGRIHEQYL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211489g00029 372 MobiDBLite consensus disorder prediction 242 295 - -
Stsc211489g00029 372 ProSiteProfiles BRX domain profile. 317 372 IPR013591 -
Stsc211489g00029 372 Pfam Transcription factor regulating root and shoot growth via Pin3 136 190 IPR013591 -
Stsc211489g00029 372 Pfam Transcription factor regulating root and shoot growth via Pin3 317 371 IPR013591 -
Stsc211489g00029 372 Pfam Transcription factor BRX N-terminal domain 25 56 IPR027988 -
Stsc211489g00029 372 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 372 IPR044532 -
Stsc211489g00029 372 ProSiteProfiles BRX domain profile. 136 191 IPR013591 -
Stsc211489g00029 372 MobiDBLite consensus disorder prediction 23 40 - -
Stsc211489g00029 372 MobiDBLite consensus disorder prediction 1 40 - -
Stsc211489g00029 372 MobiDBLite consensus disorder prediction 199 310 - -
Stsc211489g00029 372 MobiDBLite consensus disorder prediction 56 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211489g00029 Stsc-Chr211489 104793 108927 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211489g00029 1 372 Major Intrinsic Protein MIP AT1G31880 44.615 1.61e-88 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211489g00029 - - gmx:100794109 597.43