Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211489g00008 ATGCCTTGTTCCATGTCCATTGCAATTCAAACACCTGAATCCCAGAGTTTCTTCATACAAGGTTGTCCCACTCGTACTTGCAAATGCCCACCAATCTCTGCTTCTTGGACCACGGCTATGGATTCGAATTTTTCTCCAACGATGAGTAACAAGAAGAAGAAGGAACTTTCGGTTCAGCTTCCGAGTTCAGCGCCACCAATCCCAAAGTTCGAAACTTTAAGGTTCTGTGATCTTCACTTTGACCGATTACAGCCATCGCATCAAGAATTGGATCAGCACAGTAGGTTCGAATTTGGCCAATTCGTCGCACGACAAGCCCTCCTTGATGAAGAGTATTGGACAGCAGCATGGCTAAGGGCAGAAAGTTATTGGGAGAATCGAGCATATGAAAGATATACTGATCATTATAAAAGGAAATTTGCTGATCAGGAATTTAATGCAATAAAACGGCGCTGCAAGGTGCAAAATGGGGAGAGTTGCACTTGCATTATCACGGTGAAGAAAGAGCAGAAGAATGTAAAACGCTCAATCATTAAAAGTGTTGTCGGAACCCTTGATTTGAATATCCGGTACTTGCTACAAGGAGAAACTTTTCCTGGGGAACGGCCGAAGGCTCCTCCATTCTGCAGCATCAGCAAAACACCATCAAGCAGATATGGCTACATTTCAAACTTGTGTGTTGCCAAATCAGCACGACGCCAGGGAATTGCGAGCAACATGCTGTATTTTGCTGTTGAATCTGCAAAATCTATAGGTGTAGCACTTATATTTGCACATGTGGAGAGAAATAATACAGCTGCACAATCATTGTACAAGAACATGGGCTTTGAGATGGTTGAAATGGCAAACTCACTGTTGTTAGATGAGCAAACATACTTGCTACGCTTACAGACTTGA 897 0.4303 MPCSMSIAIQTPESQSFFIQGCPTRTCKCPPISASWTTAMDSNFSPTMSNKKKKELSVQLPSSAPPIPKFETLRFCDLHFDRLQPSHQELDQHSRFEFGQFVARQALLDEEYWTAAWLRAESYWENRAYERYTDHYKRKFADQEFNAIKRRCKVQNGESCTCIITVKKEQKNVKRSIIKSVVGTLDLNIRYLLQGETFPGERPKAPPFCSISKTPSSRYGYISNLCVAKSARRQGIASNMLYFAVESAKSIGVALIFAHVERNNTAAQSLYKNMGFEMVEMANSLLLDEQTYLLRLQT 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211489g00008 298 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 208 298 IPR000182 GO:0016747
Stsc211489g00008 298 CDD NAT_SF 208 259 - -
Stsc211489g00008 298 Gene3D - 118 293 - -
Stsc211489g00008 298 Pfam Acetyltransferase (GNAT) family 136 276 IPR000182 GO:0016747
Stsc211489g00008 298 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 215 281 IPR016181 -
Stsc211489g00008 298 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211489g00008 Stsc-Chr211489 25816 28234 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc211489g00008 Acetyltransf_1 5.8e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211489g00008 - - gmx:100795426 406.371