Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211489g00002 ATGAAGATTGCTGTTGGAGCAGCGAAAGGTCTATCATTTCTCCATGAACAAAAGAAGCCAGTGATCTACAGAGATTTCAAGGCTTCAAACATCTTGTTAGACTCGGATTACAATGCAAAGCTATCTGATTTCGGGTTGGCAAAAGACGGTCCAGAAGGAGATGACACACACGTATCGACACGTGTGATGGGGACACAAGGATATGCAGCACCAGAATACGTGATGACAGGTCACTTGACAGCAATGAGTGATGTGTACAGCTTTGGAGTGGTGTTGTTGGAGATGTTAACAGGAAGAAGATCAGTGGACAAGGGTCGTCCATCAAGAGAACAGAACCTTGTTGAATGGGCAAGGCCAGCACTCAACGATCCAAGGAAGCTTCCAAGGATAATGGATCCAAGGCTTGAGGGTCAGTTCTCTGAGATGGGTGCTAAGAAGGCTGCAGCCCTGGCTTATCAGTGCCTTAGTCATAGGCCTAGGAACCGTCCTTCTATGGCTACTGTGGTTAAGATCCTTGAGCCCCTTCAGGACTATGATGATGTCCCTATTGGACCCTTTGTTTACACTGTTCCACCAGATACTAATAGCACCGAAGCTGAAACTCCCAAGGAGAAGAGGAGGCACCATCACCATCACCATTCTCATTCTAGGAGGCCTCATCCTCTAAAGTCCCCCAAGACTTCACCAGATTCACAGAATAATCATCATCATCATGGTAGAACAACAAGTTCCTCTACTTCACCCGATGACAAATCCAATGCATCATCGCGGCGTGCAAACTAG 783 0.4687 MKIAVGAAKGLSFLHEQKKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTAMSDVYSFGVVLLEMLTGRRSVDKGRPSREQNLVEWARPALNDPRKLPRIMDPRLEGQFSEMGAKKAAALAYQCLSHRPRNRPSMATVVKILEPLQDYDDVPIGPFVYTVPPDTNSTEAETPKEKRRHHHHHHSHSRRPHPLKSPKTSPDSQNNHHHHGRTTSSSTSPDDKSNASSRRAN 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211489g00002 260 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 1 181 - -
Stsc211489g00002 260 ProSiteProfiles Protein kinase domain profile. 1 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211489g00002 260 PANTHER OS01G0588500 PROTEIN-RELATED 1 176 - -
Stsc211489g00002 260 Gene3D Transferase(Phosphotransferase) domain 1 1 182 - -
Stsc211489g00002 260 ProSitePatterns Serine/Threonine protein kinases active-site signature. 21 33 IPR008271 GO:0004672|GO:0006468
Stsc211489g00002 260 Pfam Protein kinase domain 3 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211489g00002 260 MobiDBLite consensus disorder prediction 186 260 - -
Stsc211489g00002 260 SUPERFAMILY Protein kinase-like (PK-like) 2 205 IPR011009 -
Stsc211489g00002 260 MobiDBLite consensus disorder prediction 238 254 - -
Stsc211489g00002 260 MobiDBLite consensus disorder prediction 205 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211489g00002 Stsc-Chr211489 1810 3415 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211489g00002 1 206 Glycoside Hydrolase AT3G07070 53.810 1.35e-68 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc211489g00002 Pkinase 1.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211489g00002 - - gmx:100799411 384.8