Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211488g00021 ATGAATTGTTTCTTCTTCAAGGATAAGCGGCGGAAGGAGAAGTGCAGGTCGGCACCGGAGCTGGAGCACGAGAATCGAGGAGGCGCGAAGAAGAAGGATCCGGCTTTGAACCGCGCAACGAACTCCACAGGCTCCATACAGCAATCGCCGAGGAGCGTGAGGGAATTGTACAAGGAGAAAGAGAAAGAGAGCAATTTCAGGGTTTTTACGTGGCAGGAGCTGAAAGATGCCACGAGTGGTTTCAACAAGATGCTAAAGATTGGAGAGGGAGGGTTTGGGAGTGTTTATAGAGGTTCTATTACGCCTAAAGATGGAAAAGGTGAACCAATTGTTGTTGCTATCAAGAAGCTTAACACACGTGGCTTCCAGGGACATAAAGAATGGCTTGCGGAAGTTCAATTTCTAAGCATTGTTAGTCACCCAAATCTGGTTAAGCTTTTGGGATACTGCTCTGTAGACGGTGAAAGAGGGATCCAACGGCTGTTGGTGTACGAGTTCATGCCCAACAGAAGCCTTGAAGATCACCTCTTCAGTAAAACTTTACCACCTCTTACTTGGAAAAGAAGATTGGAGATCATGCTTGGTGCTGCTCAAGGATTAGCATATCTACATGAGGGACTAGAGATTCAGGTGATATACCGAGATTTCAAGTCTTCAAATGTTTTATTGGATGAGAACTTCCACCCAAAGCTCTCAGATTTTGGTCTAGCTAGGGAAGGTCCACAAGGTGACCATACTCACGTCTCCACCGCGGTAGTTGGTACTCAGGGATATGCTGCTCCAGAGTATATTGAAACAGGTCACCTCAAAGTTCAGAGTGACATGTGGAGTTTTGGCGTTGTCCTCTATGAGATTCTCACCGGAAGGCGATCACTAGAAAGAAACCGTCCACCACCGGAACAAAAGCTACTAGATTGGGTTAAACAATACCCTGCTGATAGCAACAGATTTACCATGATAATTGATACCCGTTTGAGGAATCAATATTCCCTCCCTGCGGCTCGCAAAGTAGCCAAGTTGGCCGAAAGCTGCTTAAAGAAGAACCCTGAAGACAGACCATCCATGAATAAAATAGTTGAGGGTCTGAAGCACGCATTGCAGATTTCAGAAATGACAAGCAGTTCTAGCAGTGCAGGCGAATCGTCACAGTCAAAGTTGGGCCGAAAAGGTAAATAG 1176 0.4609 MNCFFFKDKRRKEKCRSAPELEHENRGGAKKKDPALNRATNSTGSIQQSPRSVRELYKEKEKESNFRVFTWQELKDATSGFNKMLKIGEGGFGSVYRGSITPKDGKGEPIVVAIKKLNTRGFQGHKEWLAEVQFLSIVSHPNLVKLLGYCSVDGERGIQRLLVYEFMPNRSLEDHLFSKTLPPLTWKRRLEIMLGAAQGLAYLHEGLEIQVIYRDFKSSNVLLDENFHPKLSDFGLAREGPQGDHTHVSTAVVGTQGYAAPEYIETGHLKVQSDMWSFGVVLYEILTGRRSLERNRPPPEQKLLDWVKQYPADSNRFTMIIDTRLRNQYSLPAARKVAKLAESCLKKNPEDRPSMNKIVEGLKHALQISEMTSSSSSAGESSQSKLGRKGK 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211488g00021 391 Gene3D Phosphorylase Kinase; domain 1 52 166 - -
Stsc211488g00021 391 MobiDBLite consensus disorder prediction 369 391 - -
Stsc211488g00021 391 ProSiteProfiles Protein kinase domain profile. 81 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211488g00021 391 FunFam Serine/threonine-protein kinase BIK1 48 166 - -
Stsc211488g00021 391 Pfam Protein tyrosine and serine/threonine kinase 85 361 IPR001245 GO:0004672|GO:0006468
Stsc211488g00021 391 MobiDBLite consensus disorder prediction 369 384 - -
Stsc211488g00021 391 ProSitePatterns Protein kinases ATP-binding region signature. 87 116 IPR017441 GO:0005524
Stsc211488g00021 391 MobiDBLite consensus disorder prediction 15 52 - -
Stsc211488g00021 391 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 167 376 - -
Stsc211488g00021 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Stsc211488g00021 391 CDD STKc_IRAK 87 363 - -
Stsc211488g00021 391 MobiDBLite consensus disorder prediction 36 52 - -
Stsc211488g00021 391 SUPERFAMILY Protein kinase-like (PK-like) 57 360 IPR011009 -
Stsc211488g00021 391 Gene3D Transferase(Phosphotransferase) domain 1 167 385 - -
Stsc211488g00021 391 PANTHER OS01G0588500 PROTEIN-RELATED 45 366 - -
Stsc211488g00021 391 MobiDBLite consensus disorder prediction 15 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211488g00021 Stsc-Chr211488 158736 161981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211488g00021 1 362 Glycoside Hydrolase AT3G07070 41.351 6.15e-88 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc211488g00021 PK_Tyr_Ser-Thr 1.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211488g00021 - - adu:107483795 734.176