Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211487g00032 ATGGCGCTTCTTCTTCCGCTCCTCCCCTTCCCACTCTTGCCTCAAGGTGTTGGTGTTGGTGTTGGTGATGACCTAGAGAGGCCTCTTGTTCTCGACCAAGGTGCTGCCAACGATGCCAATTTCTCCTCTAATGATAATAATATTAATCAGAGCAATGAATTGTCAAGAGATTATGATCTCGAAGGTGCTTGTCACCCTAACGAACTTCATTTTCGCTCTCATGGAGCACTTGGCCTTGCTCGCAAGCTGAGGCTTCCGATTCGCAATGCGCCACCACAAGGGGATGCTTTGGTTTTAGATGTTATGTCTGCAGACTCTGTTGATGTTGGCCAAACCCTCAAGCTTTCTCCAGCTCTCTTAGCTGAAGCACAAAAGCATCAGCAACTCAATCTCCAGAATGATAGGATTCAGGACTCTGTGCAGAGAGATATCCTTGGTCAAAGAAGTTGCCTTACTCTGGAGGTTATCAGTGGTCCTTCTCGAGGGATTCGATTTTCTGTACAGTCTATGAATTCTTCTAGTCTTCCCCTCACCCTGGGAAGAGTTCCTCCAAGCGATTTGGTGATAAACGATTCAGAAGTTTCGGGAAAACATGCCTTGATAAAGTGGAATTTGGATAAAATGAAATGGGAGTTGGTGGATATGGGCAGCTTAAATGGAACACTTTTGAATTCTACGCCAATCAACCATCCAGACACTGGAAGCAGGCTTTGGGGTGATCCGATCAATCTTGCCGATGGCGATATCATAACACTTGGATCAACATCGAAAATAAGTGTTCATGTTACTGCACAAAATGAGCAACACATTCCATTTGGAGTTGGTATGGCATCGGATCCCATGGCTTTGCGTAGAGGAGCAAAGAAGCTTGCTATGGAAGATGTTTGCTATTATCATTGGCCTCTGCCTGGGCTGGATCAGTTTGGGCTATTTGGTATCTGTGATGGCCACGGTGGAGATGGGGCTGCTAAATCTGCAAGCAAACTTTTTCCTGAGATAATTGCTAATATATTATTGGATTCATCAAAAAGAGAGAGGGTTTTATCACTTCATGATGCTTCAGAAATTCTGCGAGATGCATTTTCTCAAACAGAAGCATCGTTGAATAATTACTATGAGGGATGTACAGCAACAGTGCTTCTGGTGTGGGCTGATGGTGAAAATTTCTTTGCTCAATGTGCAAATGTTGGAGACTCTGCCTGTGTTATGAGTGTTAATGGGAAACAAATCAAGATGTCGGAAGATCACAAGATAACAACTTATTCTGAAAGACAGAGAATTGAAGAGACTGGCGAACCATTGAAAGATGGGGAAACACGTTTATATGGTATTAATCTTGCAAGGATGCTTGGGGACAAATTCCTGAAACAGCAGGATTCCCGGTTCAGCTCAGAGCCTTATATTAGTCAAGTGGTGCATATTGATCAAGCAAGCAGGGCTTTTGCCATTCTAGCTAGTGATGGGCTTTGGGATGTCATCAGCATGAAGAAGGCAATTCAGCTAGTGCTTCAGATGAGGGAGAGATACTGTACAGAGAGAGAGAATTTGGCGGAAAAGATTGCTAGTTCATTGTTGGGTGAGGCTAAAACACTCAGAACAAAGGACAATACCTCTGTAATTTTCTTAGATTTTGATAGCTTCAACAGATTTTCTTGTAAAGTTGAATCCTAG 1671 0.4333 MALLLPLLPFPLLPQGVGVGVGDDLERPLVLDQGAANDANFSSNDNNINQSNELSRDYDLEGACHPNELHFRSHGALGLARKLRLPIRNAPPQGDALVLDVMSADSVDVGQTLKLSPALLAEAQKHQQLNLQNDRIQDSVQRDILGQRSCLTLEVISGPSRGIRFSVQSMNSSSLPLTLGRVPPSDLVINDSEVSGKHALIKWNLDKMKWELVDMGSLNGTLLNSTPINHPDTGSRLWGDPINLADGDIITLGSTSKISVHVTAQNEQHIPFGVGMASDPMALRRGAKKLAMEDVCYYHWPLPGLDQFGLFGICDGHGGDGAAKSASKLFPEIIANILLDSSKRERVLSLHDASEILRDAFSQTEASLNNYYEGCTATVLLVWADGENFFAQCANVGDSACVMSVNGKQIKMSEDHKITTYSERQRIEETGEPLKDGETRLYGINLARMLGDKFLKQQDSRFSSEPYISQVVHIDQASRAFAILASDGLWDVISMKKAIQLVLQMRERYCTERENLAEKIASSLLGEAKTLRTKDNTSVIFLDFDSFNRFSCKVES 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211487g00032 556 FunFam Protein phosphatase 2C 70 281 551 - -
Stsc211487g00032 556 CDD PP2Cc 285 544 IPR001932 -
Stsc211487g00032 556 Gene3D - 146 282 - -
Stsc211487g00032 556 CDD FHA_PP2C70-like 151 261 - -
Stsc211487g00032 556 Pfam Protein phosphatase 2C 290 537 IPR001932 -
Stsc211487g00032 556 ProSiteProfiles Forkhead-associated (FHA) domain profile. 177 228 IPR000253 GO:0005515
Stsc211487g00032 556 FunFam Protein phosphatase 2C 70 146 280 - -
Stsc211487g00032 556 ProSitePatterns PPM-type phosphatase domain signature. 310 318 IPR000222 GO:0043169
Stsc211487g00032 556 SMART PP2C_4 267 542 IPR001932 -
Stsc211487g00032 556 Pfam FHA domain 178 253 IPR000253 GO:0005515
Stsc211487g00032 556 ProSiteProfiles PPM-type phosphatase domain profile. 273 544 IPR001932 -
Stsc211487g00032 556 SUPERFAMILY SMAD/FHA domain 150 257 IPR008984 GO:0005515
Stsc211487g00032 556 SUPERFAMILY PP2C-like 284 546 IPR036457 -
Stsc211487g00032 556 PANTHER PROTEIN PHOSPHATASE 2C 268 541 IPR015655 GO:0004722|GO:0006470
Stsc211487g00032 556 SMART FHA_2 176 228 IPR000253 GO:0005515
Stsc211487g00032 556 Gene3D - 283 554 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211487g00032 Stsc-Chr211487 166746 171052 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211487g00032 24 546 PP2C-type Phosphatase Gene Family AT5G19280 57.040 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211487g00032 K01090 - gmx:100170643 805.053