Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211486g00021 ATGCGGTCTATTCTTCCTCCTCCTGGAATCTCACTCTCTCCAACTCTTATTACACTAAACACCTCAAAAATCTCACCTTTCACTCTTAATCTCAAGAGACCAACCACTATCCCATCTTGGTCGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCACAACATGAATTCTCACTCCTTTCTCTCTCTCAATCAGGATTATGCAGGGCCAGTCAAGTGGTTGATTTGTTCCCAACTGTGTCACCCGAAATCATAGTCCGAGAGGCGAGGTTAGAGGATTGTTGGGAAGTGGCAGAAACTCACTGCAGCTCCTTCTTCCCTGAATATTCCTTCCCATTAGATTTTGTTCTGCGGATGGACAGATTGGTGGCTATGTTAGCCGGATTCTCCATACCGAGTGGCTGCAAAAGGACCTGTTTGGTTGCTGTTATCGGCAGCTCACTCGACCAAACTTTCTTGTTTGGAAGTGACGATGTCAAGATTGGTGGTTTTGAAGGGAAATTCAGCCTCAACAAGGGATATGTGGCTGGTATATTGACAGTAGATACTGTTGCAGACTTTCTACCCAGAAAGGGACCATTGAGACAGAGAAGGACTGGAATTGCATACATATCAAATGTGGCAGTGAGGGAAAAGTTTAGGAGAAAAGGAATAGCCAAACTATTAGTAGCAAAGGCAGAATCACAGGCCAAAAATTGGGGTTGCCGTGCTATCGCATTGCACTGTGATTTGAAAAACCCTGTGGCCACTAAGTTATACCAAGGCCAAGGTTTCAAATGCATTAAGGTTCCAGAAGGAGCAACCTGGCCTCAGCCAAAGACATCACCTGATATTCAGTTCAACTTCATGATGAAGCTTCTTAACAATTCACATGCTTCTTCTGTATCTAATTAG 891 0.4377 MRSILPPPGISLSPTLITLNTSKISPFTLNLKRPTTIPSWSSSSSSSSSSSSQHEFSLLSLSQSGLCRASQVVDLFPTVSPEIIVREARLEDCWEVAETHCSSFFPEYSFPLDFVLRMDRLVAMLAGFSIPSGCKRTCLVAVIGSSLDQTFLFGSDDVKIGGFEGKFSLNKGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKLLVAKAESQAKNWGCRAIALHCDLKNPVATKLYQGQGFKCIKVPEGATWPQPKTSPDIQFNFMMKLLNNSHASSVSN 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211486g00021 296 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 83 288 IPR000182 GO:0016747
Stsc211486g00021 296 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 29 289 - -
Stsc211486g00021 296 FunFam Acyl-CoA N-acyltransferases (NAT) superfamily protein 83 284 - -
Stsc211486g00021 296 CDD NAT_SF 199 240 - -
Stsc211486g00021 296 Gene3D - 78 270 - -
Stsc211486g00021 296 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 82 263 IPR016181 -
Stsc211486g00021 296 Pfam Acetyltransferase (GNAT) family 172 257 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211486g00021 Stsc-Chr211486 186138 188665 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc211486g00021 Acetyltransf_1 3.7e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211486g00021 - - adu:107467912 514.998