Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211485g00046 ATGGCTACCATTTCTGCAACTTGCTACCTCTTTATTATTCTGTCATGGTTATGCCCTACGACACTATGTGGAACTGTGTTAGAAGACCTCAAAAACTTGCACCCACCTCCAGAATTTAACTCCACAATCATGACAAACTGTCTAAATAACCCTTCTCATAGGTACTGCAATTCCTCTCCTATGAACTTTGATGAAATATTCAAATACACTATTGTTGCTAGCCATCTCTGCAATGAATCAAAGAACCCCAATTGCATAGAATCCTTCCACAAAGTTGATCTTAGAAACCGTCCAAACATTGCATCTCTTTACTTGTCATTTGAATTCTTCTGGAGGTTTTGCCCCTTAACCATTCTTTCCATTGATGTGTCTAACAACTCTTTGAAGGGGAACTTTCCTATTGATGTTCTTCATTGCACTCAAATCCATGATCTTGATTTAAGCATCAATGAGTTTTCCGGTGATATTCCAATTCAGAGTTTCTCTCCTCTCACCAACCTCACTTTCCTTAACCTATCCTATAACTGCTTCTCTGAGAGTGAAGAACTATCTGATTCACAGTTCTTCAAAAGGTTTAATTCTTCCAGTTTTCTTCATTCTGGTGCACTCTTGGATCACAGAAGGTTCTTCACATTGAAGGTTGTGATCTTATTGGTTGGTTTTCCCATCCTTGTCATTCTAATGGTGATTTTCTTAGCATGGCTTTGTTTTCAAAGGCCTGATTTTCTTCCAAGAAAACTTCAAAGAAGAAGGACCTTCACACCTGCAATTCTAAGCGCGGCGACATCTGGTTTTTCAAGCAGGAATTTAGTAGGGAAGAGTAATGTTGTTCATATCTACAAAGGGGTCTTGAGAGATGGCACCCAAGTGAAAATTGAGATGTATTGGGATGAGATTTCAAGGGAGAGTTATCTCAATTTTGTTGAAGAATGCAAGGTGCTCTCTGAGTTAGACCACAAGAACCTTGTTAGGGTTCTAGGGTGGTGTAAGAGCAGAAAATTCAGGGCTGTTATTACAGAATGGACAAGAGAAGAGAATGTTGAAATGTGGTTATTATCAGAGTCTTCTGCTCCACCACCATGGAGTCATAGAGTCAAAGTGTTAATGGGAGTTGTAGAATGCATGCGTTATCTGCAGAAGGAATGGCCTCAAGTTGACTATGATCTCAACACAAACAGTGTTCTATTGACTCAAGATTTGGAACCACTAATTTCGAGGTTCAAAGTTTTAGATCATAGCACTAGTACTACAAGAAATATATGCAAGTTTGGTGTATTCATGCTGGGAGTGATATTAAGTAGGAAAGGTCAAGAGAAGTTTGAAGGGGATGCAGATGGGTTTATTAAGAACATGAGAAGAGTTGATCTTGATCCTGAAGAGTTGCAAGAGATGATTGATGAGAGAATGGAACTAAGTGAAACTAGTTTGCATCAAGCTAAACAGGCTCTATCCCTTGGATTAATGTGCATAGATCAATCAGGCAGTGAGCAACCGAGCTTGGCCTTCATATCAAATAGCATTGCCAGAGCCTACAAGGCTACCCTTGTTTTGCCATCTGCAAATCATACAAGATCTCATGCAGATAATAGATTTAGGGGACACAAGACATAA 1611 0.3942 MATISATCYLFIILSWLCPTTLCGTVLEDLKNLHPPPEFNSTIMTNCLNNPSHRYCNSSPMNFDEIFKYTIVASHLCNESKNPNCIESFHKVDLRNRPNIASLYLSFEFFWRFCPLTILSIDVSNNSLKGNFPIDVLHCTQIHDLDLSINEFSGDIPIQSFSPLTNLTFLNLSYNCFSESEELSDSQFFKRFNSSSFLHSGALLDHRRFFTLKVVILLVGFPILVILMVIFLAWLCFQRPDFLPRKLQRRRTFTPAILSAATSGFSSRNLVGKSNVVHIYKGVLRDGTQVKIEMYWDEISRESYLNFVEECKVLSELDHKNLVRVLGWCKSRKFRAVITEWTREENVEMWLLSESSAPPPWSHRVKVLMGVVECMRYLQKEWPQVDYDLNTNSVLLTQDLEPLISRFKVLDHSTSTTRNICKFGVFMLGVILSRKGQEKFEGDADGFIKNMRRVDLDPEELQEMIDERMELSETSLHQAKQALSLGLMCIDQSGSEQPSLAFISNSIARAYKATLVLPSANHTRSHADNRFRGHKT 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211485g00046 536 Gene3D Phosphorylase Kinase; domain 1 241 341 - -
Stsc211485g00046 536 ProSiteProfiles Leucine-rich repeat profile. 166 187 IPR001611 GO:0005515
Stsc211485g00046 536 SUPERFAMILY L domain-like 88 181 - -
Stsc211485g00046 536 SUPERFAMILY Protein kinase-like (PK-like) 251 409 IPR011009 -
Stsc211485g00046 536 Gene3D Transferase(Phosphotransferase) domain 1 344 422 - -
Stsc211485g00046 536 ProSiteProfiles Protein kinase domain profile. 265 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211485g00046 536 Pfam Protein tyrosine and serine/threonine kinase 270 409 IPR001245 GO:0004672|GO:0006468
Stsc211485g00046 536 Gene3D Ribonuclease Inhibitor 63 191 IPR032675 -
Stsc211485g00046 536 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 92 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211485g00046 Stsc-Chr211485 192959 194673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211485g00046 121 503 Receptor kinase-like Gene Family AT4G33430 23.653 3.00e-22 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Stsc211485g00046 PK_Tyr_Ser-Thr 1.1e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211485g00046 - - ahf:112771647 966.066