Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211485g00045 ATGGTGGTGTTGGGTATCTCTGCGGGTTTCGTTACAGCCCTGGTGGGTGTAGTTTTGGTGGTGGGTTTGATTCTGAAGAATGTGAACTGGTTTCTTTATGAAGCTAAGTTGGGAGGAAAGCGCAGTTCTCTTCCACCTGGTGATTTGGGTTTGCCTTTTGTTGGTAACATGTGGTCCTTCCTTTCTGCTTACAAATCTCCCAACCCTGAAACTTTCATCAACTCCTTCTACTCCAGGTATGGAAAAACTGGAATGTACAAGTCTCTTATGTTTGGAAGCCCAGGAATCATTGTTACAACACCCGAATTGAGCAGAAAGATTTTGACAGATGATGAAAACTTCAAGCTTGGGTGGCCTCGTTCAACAATTGAGCTTGTTGGAGAGAAATCTTTCATTGCAATGGGCGATGAAGATCACAAGCGTCTCAGGCGTTTGACTTCTGCTTCAATCAACGGCTTGGAGCCACTTTCCATGTACTTGAAGTTCATGGATGAACTCATGAAAGAAGATTTGGAAAAATGGTCAAAGATGGGTCAGATTGAGTTGTTGACTGAACTCAGAAGGCTTACCTTCAAGATCATCATCCACATTTTCCTTGGCGCCTCCACTTTGCGCATTGATCTCCCTGGTTTTGCATTCCACAAAGCCTACAAGGCTAGAAAGAATTTGGTGGGCATATTTCAAAATGTTGTGCAAGAAAGGAGAAAGGAGAAGTTAGCAAATCCAAACAGATCAGCAAAAGACATGTTGGATCAACTGATTGATGCTGAGGATGAGAAGGGTAGGAAATTGGCTGATGATGAAGTGATTGATATTATGATAATGTATTTGAATGCTGGCCATGAATCTTCTGGACACACTACCATGTGGGCTACTTTGATCCTTCAGCAGCACCCTCACTATTTCCAAAAGGCTAAGGAAGAACAGGAGGAGATTGTGAAGCGCAGGCCACCGAATCAGAAGGGTTTGACAATGAAGGAAATTAGGCAGATGGATTTCCTCTCTAAGGCGATTGATGAAACTATGCGCTACATTACCTTCTCTTTGATGACATTCCGGGAGGCAAAGCGTGATATCACATTGAATGGTTATCTTATTCCCAAGGGTTGGAAGGTCTTTGTTTGGTATAGGGCTATTCACCAAGACCCTCAGGTTTATCCTAATCCAAGGATATTTGACCCTTCAAGATTTGATACCCCTCGCAAGGCTGGTGAATTTCTTCCATTTGGGTTGGGAACCAGATTGTGCCCTGGAAATGAGCTTGCCAAGTTGGAAATCACAGTGTTTCTTCACCACTTTCTGCTGAACTACAAGCTTGAGCATGCAAATCCAGATTCTCCTATAATGTTCCTCCCACATACAAGGCCCGTGGACAATTGCTTGGCTAGAGTTGTGAGACTTACACCTTATAATTAG 1416 0.4336 MVVLGISAGFVTALVGVVLVVGLILKNVNWFLYEAKLGGKRSSLPPGDLGLPFVGNMWSFLSAYKSPNPETFINSFYSRYGKTGMYKSLMFGSPGIIVTTPELSRKILTDDENFKLGWPRSTIELVGEKSFIAMGDEDHKRLRRLTSASINGLEPLSMYLKFMDELMKEDLEKWSKMGQIELLTELRRLTFKIIIHIFLGASTLRIDLPGFAFHKAYKARKNLVGIFQNVVQERRKEKLANPNRSAKDMLDQLIDAEDEKGRKLADDEVIDIMIMYLNAGHESSGHTTMWATLILQQHPHYFQKAKEEQEEIVKRRPPNQKGLTMKEIRQMDFLSKAIDETMRYITFSLMTFREAKRDITLNGYLIPKGWKVFVWYRAIHQDPQVYPNPRIFDPSRFDTPRKAGEFLPFGLGTRLCPGNELAKLEITVFLHHFLLNYKLEHANPDSPIMFLPHTRPVDNCLARVVRLTPYN 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211485g00045 471 PRINTS P450 superfamily signature 407 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211485g00045 471 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211485g00045 471 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211485g00045 471 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211485g00045 471 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 409 418 IPR017972 GO:0005506|GO:0016705
Stsc211485g00045 471 Gene3D Cytochrome P450 36 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211485g00045 471 PRINTS B-class P450 signature 134 145 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211485g00045 471 PRINTS B-class P450 signature 336 347 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211485g00045 471 PRINTS B-class P450 signature 353 380 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211485g00045 471 PRINTS B-class P450 signature 381 396 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211485g00045 471 PRINTS B-class P450 signature 416 427 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211485g00045 471 PRINTS B-class P450 signature 407 416 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211485g00045 471 PANTHER CYTOCHROME P450 26 42 455 - -
Stsc211485g00045 471 Pfam Cytochrome P450 211 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211485g00045 471 Pfam Cytochrome P450 45 202 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211485g00045 471 SUPERFAMILY Cytochrome P450 40 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211485g00045 Stsc-Chr211485 186353 189600 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211485g00045 18 469 Cytochrome P450 AT2G32440 57.806 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211485g00045 K04123 - gmx:100781238 640.573