Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211485g00044 ATGGCGTCTGTATCCGGCAGCATGAAGGGATTTTACAGGCAGAAGAAAAACACCACCAAATCTTCCAAGAAAGCCCCTGCGAATGCTAAGTCCGATGCACCGCAACTCGTCTCCCACGCCAACGATGATTATAGTGCTGGCGAAGCAATGCTGCGGCAATTCGACATGAACATGGCGTATGGCCCTTGCGCTGGGATGACAAGGGCGGCACGCTGGGAGCGTGCTCAAAAGCTTGGTCTCAACCCTCCACAGGAAATCCAGACCCTCTTGAAGAGTGCCAAGGTTCAGAGCGAATCCTTGTGGGATGGTCGCATTTAG 318 0.5346 MASVSGSMKGFYRQKKNTTKSSKKAPANAKSDAPQLVSHANDDYSAGEAMLRQFDMNMAYGPCAGMTRAARWERAQKLGLNPPQEIQTLLKSAKVQSESLWDGRI 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211485g00044 105 Pfam DNA polymerase delta, subunit 4 15 97 IPR007218 GO:0000731|GO:0006260
Stsc211485g00044 105 MobiDBLite consensus disorder prediction 1 28 - -
Stsc211485g00044 105 PANTHER DNA POLYMERASE DELTA SUBUNIT 4 1 103 IPR007218 GO:0000731|GO:0006260
Stsc211485g00044 105 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211485g00044 Stsc-Chr211485 184746 185555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211485g00044 1 105 Core DNA Replication Machinery Family AT1G09815 49.194 5.63e-36 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211485g00044 K03505 - gmx:100778329 142.124