Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211485g00036 ATGGCAGCCTCCACAATGGCTCTCTCCTCCCCCTCATTAGCCGGCAAGGCCGTCAAGCTCAGCCCATCAGCTCCTGAGCTTGGAGTTGGAAGAATCTCCATGAGGAAAACCGCCACCAAGCAAGCCACCTCAGGAAGCCCATGGTACGGCCCAGACCGTGTTAAGTACCTGGGCCCATTCTCCGGTGAGCCCCCGTCCTACCTCACCGGTGAGTTCCCAGGTGACTACGGCTGGGACACTGCTGGTCTTTCCGCTGACCCAGAGACCTTTGCCAGGAACCGTGAGCTCGAGGTGATCCACTCCAGGTGGGCCATGCTTGGGGCTTTGGGTTGTGTCTTCCCAGAGCTCTTGGCCCGCAACGGTGTCAAATTCGGTGAGGCCGTGTGGTTCAAGGCCGGATCACAGATCTTCAGCGAGGGTGGGCTTGACTACTTGGGCAACCCAAGCTTGATCCACGCACAGAGCATCTTGGCCATCTGGGCCACCCAGGTGATCTTGATGGGAGCTGTTGAGGGTTACCGTATTGCTGGTGGGCCTCTTGGAGAGGTGACTGACCCACTTTACCCAGGTGGCAGCTTTGACCCATTGGGCCTTGCTGACGACCCAGAGGCTTTCGCTGAGCTGAAGGTGAAGGAGCTCAAGAATGGTAGGTTGGCCATGTTCTCCATGTTCGGATTCTTTGTTCAGGCTATTGTTACTGGAAAGGGCCCATTGGAGAACCTTGCTGACCACCTTGCTGACCCAGTCAACAACAACGCCTGGGCCTATGCCACCAACTTTGTCCCCGGAAAGTGA 795 0.5736 MAASTMALSSPSLAGKAVKLSPSAPELGVGRISMRKTATKQATSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211485g00036 264 FunFam Chlorophyll a-b binding protein, chloroplastic 55 257 - -
Stsc211485g00036 264 Pfam Chlorophyll A-B binding protein 64 230 IPR022796 -
Stsc211485g00036 264 SUPERFAMILY Chlorophyll a-b binding protein 47 261 - -
Stsc211485g00036 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
Stsc211485g00036 264 Gene3D Chlorophyll a/b binding protein domain 55 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211485g00036 Stsc-Chr211485 169393 170382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211485g00036 1 264 Chloroplast and Mitochondria Gene Families AT2G34430 90.602 3.77e-176 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211485g00036 K08912 - jre:108990238 523.857