Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211485g00014 ATGCACATAAATAACATTACCACTTTTGTTTCTCGAGTTCAAATTGTGTCATCATTTGATGAACAAGTTCTGAACTCAGCTAAGAGGAAGTCACCCATCAAAGCAAATGAAGCTTCCTGGTTTAAATGCATAGATGAAACTGAAAGAGTACATAGTAGTGATGACCTTGTGAAGGATCTTGCCCATTCTAACTTGCAGAAAAGAAAGTCTACATTGATAACCGAAGGGAATGCTGCTGCATTCAAGATGCAGAGATCAAGTATGGCAAGCCATGTGGATTCCCTTGAGAGAAAGCAGCAAGATGACTTCATAGAAGAAAAATATGGTGAGGATGAAGATGACAATGATGTTGAAGACAAAGCTGATGAAAAAAAACCAGAGGCAGATAAGGATGCAGCTGATGATTATAGAGAGGAAGGAGAGTACTTACTAGGAGATGACTGCACAACTGCAGAGGAACTTCATGAAGGTCTGCTCATAAAAGATGGAGATGAAAACAGCAAACATTCTGCTCGACATTTCAGCCATGGATATCACTTGACCGAAGGAAAGTTGAACCATGGAATGGAGGACTACATTTTTGCTCAACATAAGAAGCTCAATGGTTATGACTTGGGATTGTATGCAATATTTGATGGTCATTCAGGTCATGATGTTGCCAAATACTTGCAAAGCCATCTATTTGAAAATATACTAAATGAGCCTAGTTTCTGGGAGAAACCAGTGCATGCAGTTAAGAAAGCGTGCAAGGCTATAGACAATGAGATCTTAGAGAATATAGCAGATTCACGAGGAGGATCAACAGCTGTTGCAGCAATACTAATTGACGGAGTGAAGCTGCTTGTAGCCAATGTGGGCGATTCTCGAGCGATATCATGCAAAAATGGCATTGCAAAACCAATAACTGTGGATCATGAACCAGAGAAGGAGAAAGATCTCGTTGAAAGCAGAGGGGGCTGTGTGTTCACAAGACCAGGAGATATTCCAAGAGTGGACGGCCAATTAGCAATGACAAGAGCATTTGGAGATGGAAAACTGAAGGAGCACATTACTTCAGAGCCAGATGTGATGATCCGGAAGATTGATGATGACACTGACTTCATCATTTTGGCAAGTGATGGTCTGTGGAAGGTGATGACAAATCAGGATGCTTGTGACTGTATCAAAGATGATGTTGATGATGCTAAGAAAGCTGCTAAGAAGTTAGTTAAAGAAGCCAAGTCTCTAGGAAGCTATGATGATATTTCATGCATAGTTGTTACTTTCTAG 1269 0.4058 MHINNITTFVSRVQIVSSFDEQVLNSAKRKSPIKANEASWFKCIDETERVHSSDDLVKDLAHSNLQKRKSTLITEGNAAAFKMQRSSMASHVDSLERKQQDDFIEEKYGEDEDDNDVEDKADEKKPEADKDAADDYREEGEYLLGDDCTTAEELHEGLLIKDGDENSKHSARHFSHGYHLTEGKLNHGMEDYIFAQHKKLNGYDLGLYAIFDGHSGHDVAKYLQSHLFENILNEPSFWEKPVHAVKKACKAIDNEILENIADSRGGSTAVAAILIDGVKLLVANVGDSRAISCKNGIAKPITVDHEPEKEKDLVESRGGCVFTRPGDIPRVDGQLAMTRAFGDGKLKEHITSEPDVMIRKIDDDTDFIILASDGLWKVMTNQDACDCIKDDVDDAKKAAKKLVKEAKSLGSYDDISCIVVTF 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211485g00014 422 FunFam Probable protein phosphatase 2C 39 167 422 - -
Stsc211485g00014 422 ProSiteProfiles PPM-type phosphatase domain profile. 175 422 IPR001932 -
Stsc211485g00014 422 PANTHER PROTEIN PHOSPHATASE 124 420 IPR015655 GO:0004722|GO:0006470
Stsc211485g00014 422 Gene3D - 160 422 IPR036457 -
Stsc211485g00014 422 Coils Coil 385 405 - -
Stsc211485g00014 422 MobiDBLite consensus disorder prediction 91 105 - -
Stsc211485g00014 422 CDD PP2Cc 174 422 IPR001932 -
Stsc211485g00014 422 MobiDBLite consensus disorder prediction 89 135 - -
Stsc211485g00014 422 Pfam Protein phosphatase 2C 187 414 IPR001932 -
Stsc211485g00014 422 SMART PP2C_4 165 420 IPR001932 -
Stsc211485g00014 422 SUPERFAMILY PP2C-like 171 422 IPR036457 -
Stsc211485g00014 422 MobiDBLite consensus disorder prediction 119 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211485g00014 Stsc-Chr211485 43145 45452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211485g00014 172 422 PP2C-type Phosphatase Gene Family AT3G15260 58.730 2.78e-101 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211485g00014 - - gmx:100814772 479.174