Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211484g00035 ATGGCTTCTACCAACCATATTATTAATGATAAGCCACTCACAACAATCCCCGGAAGTTATGGCCATCCCTTCTTCGGAGCCATAAAGGACCGCCACGACTTCTTCTACCACCAAGGCCGAGACCAATTCTTCGCAGCCAAGATAAAAAAGTACAACTCCACCGTCATCCGTACTAACATGCCACCTGGCCCCTTCATCTCCTCCAATCCAAGAGTCGTAGCTCTCCTCGACGCTATTTCCTTCCCTATCCTCTTCGACAACTCGAAGGTTGAGAAGCGCAACGTTCTTGACGGTACCTTCATGCCTACCACTGCCTTCACCGGCGGCTATCGCGTCTGCGCCTACCTCGACACCGACGAGCCCGCCCACGCCGCACTCAAGACCTTCTTCATCTCCACCATCGCCAAAAGGAAGGAACTATTTCTTCCTCTCTTCCAAAACACCCTTGCCGAATGCTTCACTGAAATCGAGAATAATCTGTCTTCTGCCAAAACTGCAACTGCTAGCCTAAACGACGCCGTCTCCTCCGCCTCCTTCAACTTCATGTTCCGCCTCTTGTGCAACAATAAAGATCCTGCAGAAACAAAGCTAGGCTCAGAGGGGCCGAAGCTGTTTGACACGTGGCTACTGTTCCAGCTGGCACCTCTGGCCACCCTGGGGCTGCCAAAGATCTTCAATTACATTGAGGATTTCTTGATCCGTACGGTTCCATTCCCAGCTCTCTTCGCCAAATCCAGCTACAACAAACTCCACGAAGCTTTCTCCGCCAACGCCGGGAAGCTTCTAGAAGAAGCGGAGAAGGCCGGGATCGAAAGAAACGAAGCCATTCACAACATAATATTCATGGCGGGGTTCAACGCCTACGGAGGGTTGAAGAACCAGTTCCCAACACTGATGAAGTGGGTGGGTTTGGGTGGCGAGAAGCTTCACAAGGAGATAGCTGCAGAAGTTAGAAGTATAGTTAAAGAAGAAGGAGGCATCACATTGAAAGGTCTGGAGAGAATGGCTTTAGTGAAATCTATTGTGTATGAAGCTATGAGGATAGAGCCTGCAGTGCCGTACCAATATGCCAAGGCCAGGGAGGACATAATAGTAAATAGCCACGACAACTCTTTTGAGATCAAGAAAGGGGAGATGATATTTGGGTATCAACCCTTCGCCACCAAAGATTCTAGAATCTTCGAGAAGGCGGAGGAGTTTGTTGCGAGGAGGTTCGTTGGGGAGGATGGGGAGAAGTTGTTGAAGTACGTGGTGTGGTCCAACGGGCGCGAAACGGAGGAGCCGGCGCCGGAGAATAAGCAGTGTCCGGGGAAGAATCTGGTGATACTACTGTGCAGGGTATTTTTGGTGGAATTTTTCTTGAGATATGATACCTTTGAGTTTACATATAAGAATATTGTTTTGGGTCCTAATGTTACCATCACCTCTCTCACTAAGGCCTCGTCTACCTTCTAA 1455 0.4942 MASTNHIINDKPLTTIPGSYGHPFFGAIKDRHDFFYHQGRDQFFAAKIKKYNSTVIRTNMPPGPFISSNPRVVALLDAISFPILFDNSKVEKRNVLDGTFMPTTAFTGGYRVCAYLDTDEPAHAALKTFFISTIAKRKELFLPLFQNTLAECFTEIENNLSSAKTATASLNDAVSSASFNFMFRLLCNNKDPAETKLGSEGPKLFDTWLLFQLAPLATLGLPKIFNYIEDFLIRTVPFPALFAKSSYNKLHEAFSANAGKLLEEAEKAGIERNEAIHNIIFMAGFNAYGGLKNQFPTLMKWVGLGGEKLHKEIAAEVRSIVKEEGGITLKGLERMALVKSIVYEAMRIEPAVPYQYAKAREDIIVNSHDNSFEIKKGEMIFGYQPFATKDSRIFEKAEEFVARRFVGEDGEKLLKYVVWSNGRETEEPAPENKQCPGKNLVILLCRVFLVEFFLRYDTFEFTYKNIVLGPNVTITSLTKASSTF 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211484g00035 484 SUPERFAMILY Cytochrome P450 9 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00035 484 CDD CYP74 47 475 - -
Stsc211484g00035 484 Pfam Cytochrome P450 310 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00035 484 Gene3D Cytochrome P450 8 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00035 484 FunFam Allene oxide synthase, chloroplastic 11 482 - -
Stsc211484g00035 484 PANTHER CYTOCHROME P450 26 14 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211484g00035 Stsc-Chr211484 179497 182000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211484g00035 10 481 Cytochrome P450 AT5G42650 47.780 4.31e-164 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211484g00035 K01723 - gmx:100801764 705.286