Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211484g00028 ATGGCGAAAAGATATGAGGGACATGCGGTGGGAATAGACCTTGGTACGACCTACTCATGTGTTGCTGTGTGGAAGGATGATCACCAGAGAGTGGAGATCATCCACAATGACCAAGGCAACAGAACAACACCTTCTTGTGTTGCTTTCACTGATAAGCAAAGGTTGATCGGTGATGCTGCTAACAATCAAGCTGCTTCTAATCCAACTAACACTATCTTTGGTAATTCATCTTCTTTTCTTAATGACATGATGCTGTGGCCATTTAAAGTCATTCCTGGTGATGGTGACAAACCAATGATTTCTGTTACATATAAGGGTCAGGAGAAGCATCTTTCTGCTGAAGAAGTTTCATCGATGGTTCTAACAAAAATGCGGGAGATTGCAGAGGCATATTTGGAAGCTCCTGTAAATAATGCAGTGATTATTGTGCCTGCTTATTTCAGTGACTCTCAACGAAAAGCAACAAAAGATGCTGGTGCCATTGCAGGCCTCAATGTCATGAGAATTATCAATGAGCCTACTGCTGCAGCAATTGCATATGGCCTTGACAAGGTCTTTGAAGTTAAGGCCACTGCAGGAAATACTCACCTTGGTGGAGAAGACTTTGATAACAGAATGGTGAATTACTTTGTACAAGAGTTCAAAAGGAAGAACAAGTTGGATATTAGTGGGAATCCAAAAGCCTTGCGAAGGATGAGAAGTGCATGCGAAAGAGCAAAAAGGACACTCTCATTTGCTGTTGATACTGTAGTTGAAGTTGATGCTTTATACCAGGGCATTGACCTTTATTCATCACTCAGCCGTGCCAAGTTTGAGGAACTCAACATGGAACTCTTTAAAGAGTGTATGGAAATAGTAGATAAGTGTCTCACTGATGCTAAGACAGACAGGTCTTGTATACATGACGTGGTCCTTGTTGGCGGCTCTTCTAGGATTCCCAAAGTGCAACAGCTATTGCAGGAATTCTTTAGAGGGAAGGATCTTTGCAGGAGTATTAACCCGGATGAAGCTGTTGCCTTTGGAGCAGCAGTTCAGGCTGCTTTATTGAGTGAAGACGTCAAGAAAGCACCAGAATTAGTTCTATTAGATATTACTCCCTTATCACTTGGTATATCAACAACAGCATTAAACGTCATGGATGTAGTGATTCCTAGGAATACTACCATACCTGCAAACAGGACAAAGGTATACGGTACAACTGCAGATAACCAAACCTGGGTTTCAATTAATGTTTATGAGGGTGAGAGGACAAAAGCAACTGATAACAACTTATTGGGTTTATTTAATCTTTCTGGTCTTCCTTGTGCTCCTCGTGGCCATCCTTTGTATGTATGCTTCAATATAGATGCTGATGGTATCCTAAACGTATCTGCCTGGGAAGAAACCAATCATTGTAGGAATGAAATTACTATTACTAATGACAAAGAAAGACTTTCAGCCACAGAAATTCAAAGATTAACTGAGGAAGCTGAGAATTACAAGATTGAAGATGCAAAGTTCCTTGAGAAGGCTAATGCAATGAATGCTTTAGATCATTATGTTTACAGGATGGAAAAAGCTCTAAAGGATCAACACATTATCTCTAAGCTTTACCCTTTTGACAAGGAGAAGATCCATTCTGCAATTGCTAAGGCCAGGAATCTGCTTGATGGTGATAACCAGCAGCGAGATGTCGATGAGTTTAATAAATGTCTAAGGGAGGTCAAGGGCATATTTGAACACATCATGGCCAAGAATGGATTTTCCTTCTTGTCTCTTTCCTAA 1764 0.407 MAKRYEGHAVGIDLGTTYSCVAVWKDDHQRVEIIHNDQGNRTTPSCVAFTDKQRLIGDAANNQAASNPTNTIFGNSSSFLNDMMLWPFKVIPGDGDKPMISVTYKGQEKHLSAEEVSSMVLTKMREIAEAYLEAPVNNAVIIVPAYFSDSQRKATKDAGAIAGLNVMRIINEPTAAAIAYGLDKVFEVKATAGNTHLGGEDFDNRMVNYFVQEFKRKNKLDISGNPKALRRMRSACERAKRTLSFAVDTVVEVDALYQGIDLYSSLSRAKFEELNMELFKECMEIVDKCLTDAKTDRSCIHDVVLVGGSSRIPKVQQLLQEFFRGKDLCRSINPDEAVAFGAAVQAALLSEDVKKAPELVLLDITPLSLGISTTALNVMDVVIPRNTTIPANRTKVYGTTADNQTWVSINVYEGERTKATDNNLLGLFNLSGLPCAPRGHPLYVCFNIDADGILNVSAWEETNHCRNEITITNDKERLSATEIQRLTEEAENYKIEDAKFLEKANAMNALDHYVYRMEKALKDQHIISKLYPFDKEKIHSAIAKARNLLDGDNQQRDVDEFNKCLREVKGIFEHIMAKNGFSFLSLS 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211484g00028 587 PANTHER HEAT SHOCK PROTEIN 70KDA 9 544 IPR013126 GO:0005524|GO:0140662
Stsc211484g00028 587 Coils Coil 483 503 - -
Stsc211484g00028 587 Gene3D Actin; Chain A, domain 4 199 281 - -
Stsc211484g00028 587 SUPERFAMILY Actin-like ATPase domain 181 350 IPR043129 -
Stsc211484g00028 587 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Stsc211484g00028 587 Gene3D - 10 184 - -
Stsc211484g00028 587 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 354 507 IPR029047 -
Stsc211484g00028 587 Gene3D - 508 579 IPR029048 -
Stsc211484g00028 587 FunFam Heat shock 70 kDa 198 281 - -
Stsc211484g00028 587 Gene3D - 185 329 - -
Stsc211484g00028 587 PRINTS 70kDa heat shock protein signature 139 159 - -
Stsc211484g00028 587 PRINTS 70kDa heat shock protein signature 439 455 - -
Stsc211484g00028 587 PRINTS 70kDa heat shock protein signature 332 352 - -
Stsc211484g00028 587 PRINTS 70kDa heat shock protein signature 38 50 - -
Stsc211484g00028 587 PRINTS 70kDa heat shock protein signature 8 21 - -
Stsc211484g00028 587 PRINTS 70kDa heat shock protein signature 358 377 - -
Stsc211484g00028 587 PRINTS 70kDa heat shock protein signature 60 68 - -
Stsc211484g00028 587 Gene3D - 73 119 - -
Stsc211484g00028 587 ProSitePatterns Heat shock hsp70 proteins family signature 3. 303 317 IPR018181 -
Stsc211484g00028 587 SUPERFAMILY Actin-like ATPase domain 8 184 IPR043129 -
Stsc211484g00028 587 FunFam Heat shock 70 kDa protein 352 507 - -
Stsc211484g00028 587 FunFam Heat shock protein ssb1 75 119 - -
Stsc211484g00028 587 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 356 511 IPR029047 -
Stsc211484g00028 587 Gene3D - 330 347 - -
Stsc211484g00028 587 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 506 578 IPR029048 -
Stsc211484g00028 587 Pfam Hsp70 protein 9 184 IPR013126 GO:0005524|GO:0140662
Stsc211484g00028 587 Pfam Hsp70 protein 185 576 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211484g00028 Stsc-Chr211484 147248 149031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211484g00028 1 578 Calmodulin-binding Proteins AT3G12580 61.066 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211484g00028 K03283 - mof:131149549 727.243