Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211484g00022 ATGGGAACAGAAGAATCCAATAAATTTGGTGCATCTTTCAAGTTTATGGACCCTAAAGATGAAACTATAAACATGCCTTTTCATCCACATTGGACTAGTTCTATGCAGGCATATCATAATGCTGGTTCTACCCCAAATCCCTTCTTAAACCCTCATGCATCTGGTCCCTACTTCAGTCATTGCATTTGGCCAAATCAGTCGAATATCGCTCAAGTTCAATATAATTTTATGCATGACTCCATGAAGCTTTCTAATAATTCTGCTGTAGCTGGAGTGCTTCCAAATCATCAGCAACAACCAAGTGTTGTCCCAGTAGTTGGGGATGCTGCATCAGTGTTTTCAGAAAAAGTACAAAGGATGTTTGGCGCAAACAACAAAGATTCAATTAAAAAATGTGATGGAAACTTACAATCTAAAAGCTCAATCACTAAGGAAGCAAGAGAAGCTGAGCATGGTTGTTCAACTCCAAACCATGACATGAGTGGAGCAAGTGGAGGCAAAGAAGGCCAGTGCAGTAAAAATGATTTCCCTTCACCAAAGCAGAAATGCAATGTGATGCCTGGAAATGAAAATTCGAATAAACAGAACAAGGACACAATTGCTGGCCTAAATGCTTCTGGCAGTATAGCTCAACTTGCAAAGCTGGAAGATGATGAAAAAAGGAAAGAAAGAAAAAGACAATCTAATCGCGAATCAGCCAAGAGATCAAGGTTAAGAAAACAGAAAGAATGTGAAGAGCTACATGGAAACATGGAAAATCTAAAGGATGAAAATTCCTCGCTCACACAAACGCTTGTAAGGCTTTCAGAGGAATGTCTAGATCTCAGCAATGAAAACGATTCCATCCAGGAAGAGCTGGTTAAGATGTATGGAGCTGAATCAATAGCAGATCTATTGCCCATGAAGCCTTCTTGA 915 0.3967 MGTEESNKFGASFKFMDPKDETINMPFHPHWTSSMQAYHNAGSTPNPFLNPHASGPYFSHCIWPNQSNIAQVQYNFMHDSMKLSNNSAVAGVLPNHQQQPSVVPVVGDAASVFSEKVQRMFGANNKDSIKKCDGNLQSKSSITKEAREAEHGCSTPNHDMSGASGGKEGQCSKNDFPSPKQKCNVMPGNENSNKQNKDTIAGLNASGSIAQLAKLEDDEKRKERKRQSNRESAKRSRLRKQKECEELHGNMENLKDENSSLTQTLVRLSEECLDLSNENDSIQEELVKMYGAESIADLLPMKPS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211484g00022 304 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 219 282 IPR004827 GO:0003700|GO:0006355
Stsc211484g00022 304 MobiDBLite consensus disorder prediction 143 242 - -
Stsc211484g00022 304 SUPERFAMILY Leucine zipper domain 221 275 IPR046347 GO:0003700|GO:0006355
Stsc211484g00022 304 SMART brlzneu 216 281 IPR004827 GO:0003700|GO:0006355
Stsc211484g00022 304 Pfam bZIP transcription factor 219 279 IPR004827 GO:0003700|GO:0006355
Stsc211484g00022 304 MobiDBLite consensus disorder prediction 213 242 - -
Stsc211484g00022 304 Coils Coil 237 285 - -
Stsc211484g00022 304 PANTHER G-BOX-BINDING FACTOR 3-RELATED 14 292 IPR044827 GO:0003700|GO:0006355|GO:0043565
Stsc211484g00022 304 MobiDBLite consensus disorder prediction 174 206 - -
Stsc211484g00022 304 Coils Coil 212 232 - -
Stsc211484g00022 304 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 224 239 IPR004827 GO:0003700|GO:0006355
Stsc211484g00022 304 CDD bZIP_plant_GBF1 222 272 IPR045314 GO:0003700|GO:0006355
Stsc211484g00022 304 Gene3D - 219 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211484g00022 Stsc-Chr211484 123242 125824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211484g00022 1 298 bZIP Transcription Factor Family AT4G36730 31.348 1.24e-28 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc211484g00022 bZIP_1 1.6e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211484g00022 K09060 - gmx:102665715 276.559