Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211484g00016 ATGGATTCTCTTATCCTTGACTTGCTATCTCTTGTCTCCTTCATACTCTTCATTGTTGCAGCCCTGATAATTGGAAGGAATCTCAAGAAAAATGAGTCAATTCCAAACATACCCCCAGGGCCATGGAAGCTACCTATTATAGGAAGCATACACCATCTTGTTACATCCAAACCACACCGAAAATTAAGAGATTTGGCCAATATATATGGGCCATTGATGCACCTTCAGCTTGGAGAGATATTCACCATAGTTATCTCTTCACCAGAATATGCTAGAGAGGTCATGAAAACCCATGATGTAGTATTTGCATCAAGGCCTAAAATTCTGGCTTCAGAAATAATGGCTTATGATTCCACAGATATAGTTTTCGCACCTTATGGAAATTATTGGAGACAGCTGAGGAAAATTTGCACATTGGAGCTTTTCAGCACCAAACGGGTCAAGTCTTTCCAGCCAATAAGAGAAGAAGAGTTTAGCAATCTCATGACAAGGATTGCATCGGTGAAAGGATCAACTGTCAACCTCACTGAAGAAGTATTTTCATCAATATATACAATCAATTCCAGGGCAGCATTTGGAATGAAATGCAAAGATCAAGAAAAATACATTTCTGTTATAAATGAAGCAATAACGGCTGCTGCAGGTTTTGATTTAGGAGATTTGTTTCCTTCTTCCAAATGGCTCCAACTCATCAGTGGCTTGAGGCCTAAGGTTGAGAGGCTGCAAGGACAAAGTGACCAAATACTAGAAAACATCATCAATGAGCACAGAGAAACGAAGTTAAAAGCCAAAGAAGGTGAACATGAATCAGATGAAGATCTTGTGGATGTTCTCCTAAAATTTGAGGGTGGTAATGCATTGGGCCAGGATATATGCTTAACTACAAATAATATTAAAGCTATCATACAGAATATTTTTGGAGCTGGTGGTGGGACAACAGCAACTACAATAGATTGGGCAATGGCAGAAATGATAAAGGATCCAACAATAATGAGGAAGGCACAAGATGAGGTGAGAGAAAACTTCAATAAGAAAGTAAGGGTTGATGAAACTTGCCTCTATAAACTCAAATATCTGAAATCAGTGGTCAAAGAGACCCTCAGATTACACCCTCCAGTTCCTCTTTTGCTGCCAAGAGAATGCAGATCTGCATGCAAAACGAATGGCTATTACATACCTGAAAAGAGTAAGGTCATTGTGAATGCTTGGGCAATAGGAAGAGATCCAAACTACTGGAGTGAACCAGAAAGGTTTCATCCAGAGAGATTCTTTGATAGCTCTATTGACTATAAAGGGAACAATTTCGAGTACATTCCATTTGGTGCAGGAAGAAGAATGTGTCCCGGCAGCGCATTAGGCGTGATCAACGTTGAACTTGCCCTCGCATATTTATTGTATCACTTTGATTGGAAGCTTCCCGGTGAAATGAGAAGTGAGGAATTGGACATGACTGAGGCACTTGGAGTGACTGTCAGAAGAAAAGATGACCTGAAATTGGTTCCCATTGCTTCTCATCCTTTGCTTGAAGCATAA 1533 0.4005 MDSLILDLLSLVSFILFIVAALIIGRNLKKNESIPNIPPGPWKLPIIGSIHHLVTSKPHRKLRDLANIYGPLMHLQLGEIFTIVISSPEYAREVMKTHDVVFASRPKILASEIMAYDSTDIVFAPYGNYWRQLRKICTLELFSTKRVKSFQPIREEEFSNLMTRIASVKGSTVNLTEEVFSSIYTINSRAAFGMKCKDQEKYISVINEAITAAAGFDLGDLFPSSKWLQLISGLRPKVERLQGQSDQILENIINEHRETKLKAKEGEHESDEDLVDVLLKFEGGNALGQDICLTTNNIKAIIQNIFGAGGGTTATTIDWAMAEMIKDPTIMRKAQDEVRENFNKKVRVDETCLYKLKYLKSVVKETLRLHPPVPLLLPRECRSACKTNGYYIPEKSKVIVNAWAIGRDPNYWSEPERFHPERFFDSSIDYKGNNFEYIPFGAGRRMCPGSALGVINVELALAYLLYHFDWKLPGEMRSEELDMTEALGVTVRRKDDLKLVPIASHPLLEA 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211484g00016 510 Gene3D Cytochrome P450 30 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00016 510 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00016 510 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00016 510 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00016 510 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00016 510 CDD CYP71-like 69 497 - -
Stsc211484g00016 510 PANTHER OS08G0105600 PROTEIN 61 506 - -
Stsc211484g00016 510 SUPERFAMILY Cytochrome P450 38 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00016 510 Coils Coil 249 269 - -
Stsc211484g00016 510 FunFam Cytochrome P450 71D8 30 501 - -
Stsc211484g00016 510 Pfam Cytochrome P450 38 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00016 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Stsc211484g00016 510 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00016 510 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00016 510 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00016 510 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00016 510 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00016 510 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00016 510 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00016 510 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211484g00016 Stsc-Chr211484 88702 97801 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211484g00016 8 501 Cytochrome P450 AT3G26300 41.118 3.45e-135 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211484g00016 - - gmx:100801936 743.806