Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211484g00013 ATGGATTCTCAAATATTTAACTTCCTTGCTTTCATCTTCTTTCTCTTCTTCGTCATTGCTTCACTGAGAATCCGAAACAATCACAAGAAAACTGATCCAATTCCAAATGTACCCCCAGGACCATGGAAGCTACCTATCATAGGAAACATACCAAATCTTGTTACATCCACACCACATAGAAAACTAAGAGATTTGGCAAACAAATATGGGCCATTGATGCACCTTCAACTTGGTGAAGTCTCTACAATTGTTATTTCCTCAGCAGAGTATGCTAAAGAGGTTATGAACACACATGACATCATCTTTGCTTCAAGGCCTGCAATTCTAGCTGCAAAGATAATTTCTTATGATTGCACAAACATTGGTTTTGCACCATATGGAAATTATTGGAGGCAGTTAAGGAAGATTTGCACGTTGGAGCTTTTCAGCACGAAACGAGTCAATTCTTTCCGGCCGATAAGAGAAGAAGAGTTCACCAACCTGGTTAAAAGGATTATGTCCTCAAAGGAAGGATCAGTTAACCTCACTGAAGAAGTGCTTTCATCGATATATGGAATCGTTTCGAGGTCTGCTTTTGGTGGCACGAAACGTGAAGATCAAGAAAAGTTCATATCGCTTGTGCAGCAAGCAACAATGGTTGCAGGAGGTTTTGATGTAGGAGATCTGTTTCCTTCTTGGACATGGCTTCAACTTGTGAGTGGTTTGAGGCCTAAGCTTGAGAGTTTCCAAAGACAAATTGATCAGATATTGGAAAACATTGTTAGTGATCACAAAGAGGCAAAGTTGGAAGGTAAAGAAGGCGAAAAAGGTTATGAATCAGATGAAGATCTTGTGGATTTTCTCCTTCAATTTGAAGATGGTACCAATCAAGATATTTGCTTAAGCAGAAACAATATCAAAGCTATACTTGTGGATATCTTTGGTGGAGGAAGTGAGACCTCGGCGCATACCATAGATTGGGCAATGATAGAGATGATAAGGGATCCAAGAGTAATGAAGAAAGCACAAGTTGAGGTCAGAGAATTATTCAACAGTATTGGAAAGGTTGATGAGACTCTCATCAATGAACTCAAGTATTTGAAATCAGTTGTGAAAGAGACACTAAGGTTACACCCTCCAGCTCCTCTTTTACTTCCAAGAGAATGTGGAGAAGCCTGTGAGATCAATGGATATTACATTCCCTACAAAAGTAAGGTCATAGTGAATGCTTGGGCAATCGGAAGAGATCCAAACAATTGGAGCGAACCGGAGAAGTTTTATCCGGAGAGGTTCATTGACAGTTCTGTAGACTACAGAGGGAATAATTTCGAGTACATACCGTTTGGTGCTGGAAGAAGAACATGCCCCGGAAGCACATTAGGCTTGTTAAATGTTGAGCTGGCACTCGCATATTTGTTGTATCACTTTGATTGGAAGCTTCCAAATGGAATGAAACCTGAGGAATTGGACATGTCTGAGGCATTTGGAATGACTGTTAGAAGAAAAAATGACCTGCAATTGGTTCCCATTGCTTTTAGTCCTTTGCTCGAAAAATAA 1536 0.4004 MDSQIFNFLAFIFFLFFVIASLRIRNNHKKTDPIPNVPPGPWKLPIIGNIPNLVTSTPHRKLRDLANKYGPLMHLQLGEVSTIVISSAEYAKEVMNTHDIIFASRPAILAAKIISYDCTNIGFAPYGNYWRQLRKICTLELFSTKRVNSFRPIREEEFTNLVKRIMSSKEGSVNLTEEVLSSIYGIVSRSAFGGTKREDQEKFISLVQQATMVAGGFDVGDLFPSWTWLQLVSGLRPKLESFQRQIDQILENIVSDHKEAKLEGKEGEKGYESDEDLVDFLLQFEDGTNQDICLSRNNIKAILVDIFGGGSETSAHTIDWAMIEMIRDPRVMKKAQVEVRELFNSIGKVDETLINELKYLKSVVKETLRLHPPAPLLLPRECGEACEINGYYIPYKSKVIVNAWAIGRDPNNWSEPEKFYPERFIDSSVDYRGNNFEYIPFGAGRRTCPGSTLGLLNVELALAYLLYHFDWKLPNGMKPEELDMSEAFGMTVRRKNDLQLVPIAFSPLLEK 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211484g00013 511 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00013 511 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00013 511 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00013 511 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00013 511 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00013 511 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00013 511 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00013 511 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00013 511 PANTHER OS08G0105600 PROTEIN 61 505 - -
Stsc211484g00013 511 Pfam Cytochrome P450 38 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00013 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Stsc211484g00013 511 FunFam Cytochrome P450 71D8 30 502 - -
Stsc211484g00013 511 CDD CYP71-like 68 498 - -
Stsc211484g00013 511 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00013 511 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00013 511 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00013 511 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00013 511 SUPERFAMILY Cytochrome P450 38 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211484g00013 511 Gene3D Cytochrome P450 22 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211484g00013 Stsc-Chr211484 74659 76272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211484g00013 11 505 Cytochrome P450 AT3G26300 43.056 3.60e-140 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211484g00013 - - gmx:102665189 702.205