Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211483g00041 ATGGCTTCTCTGATGATTGCTCTCGTTTTTCTAATCTTATTACTTGTTCCGCTACTCTTTCTTTTCCGGAGCCGCCGAGGAGCCAAAGAGCCACCGTTAGCGGCGGGAGCATGGCCCATAATAGGCCACCTCTGGCTCTTCACTGGTTCCCAACCACCACAGATAACTCTAGGCGCCATGGCCGACAAATACGGAGCCATATTCAGAATCAAGATCGGATCAAAACGTGCTGTGGTCATCAACAACTGGAAAACCGCTAAGGAATGCTTCACCACCAATGACATCGCCCTGTTATCGCGGCCAAGGGTGGTCGCCGTCGAACACCTTACCTATAACCAAGCCATATTGTCCTTCGCACCTTACGGCCATTATTGGCGCGAGATGCGAAGGATTGCCAACCAGGAACTGCTCTCCACTCGCCGAATCGAGTTATCAAGCCACCTTCGTGTCTCAGAGTTAGAATCCAGCATTAAAGCGCTCTACAAACTCTGGGCTGATGAGAAACACGACGAAGACGGCAACGACAACGAAAACTCGGGCTATGTAGCGGTGGAGATGAAGAATTGGTTTGGAGAGTTGATGCTGAATATAGTTCTTAGAGTGGTTGCGGGAAAGCGGTGTTTTGGTGGTTCTGGTGAAGAGGAGGAAGCAGAGCGGTTCTTGAAAACCATGAGAGAATTCATGCGGCAGCTGGGGTTGTTTGTGGTGGGTGACGCTGTTCCTTGGCTTCGGTGGCTGGATTTGGGTGGCCATGAGAAAGCCATGAAAGAGACCGCTAAGGAGATGGACGCCATTATGGTGGAGTGGTTAGAGGAGCATCGCCGGAAAAGAGCTAATTCTGATCAGGATGCTGTGGATCAAGACTTCATGGACGTGATGCTCTCAATTCTTGATGGCACTCAACTTGCTGGATTTGATTCTGATACCATCATCAAAGCCACCACTTGGATTCTGATGGGAGGATCAATTGACACGGCTTCAGGAACTCTAGTATGGATACTATCATGTATGTTGAACAATAAAGCCACTATAGAACAAGCACAAATAGAGTTGGACATCCATGTTGGTAAAGAAAGAATTGTAAGAGAAACCGATATAAGTAAATTGGTATACATTCAAGCCATCGTTAAAGAGACATTAAGGCTATATCCTACAGCAATTTTTTCAGGTCCTCGTGAGTTCACAGATGATTGCTTTGTTAATGGCTACTACATTCCAAAGGGTACGCAACTAATCACAAATTTATGGAAGATTCACACGGATCCTAGCATTTGGTCTGACCCATTAGACTTTAAGCCGGAGAGGTTCCTTACCACTCACAAAGATGTTGATGTGAGAGGTAACCACTTTGAGTTAATGCCGTTTGGAAGTGGGAGAAGAATGTGTCCCGGTTTATCATTTGCCCTTCCCATGATTCATCTAACTGTGGCTACTTTCCTGCAATGCTTTGAAATTTCAAAGCCATCTAATGAACCCGTTGATATGACTGAAATCTTTGGCCTCACAACCATGAAAGCTACTCCACTTGATGTTCTCATCAAGCCACGTCTTTCTTCTAGGCTTTATGGTTTATCGTGA 1578 0.4607 MASLMIALVFLILLLVPLLFLFRSRRGAKEPPLAAGAWPIIGHLWLFTGSQPPQITLGAMADKYGAIFRIKIGSKRAVVINNWKTAKECFTTNDIALLSRPRVVAVEHLTYNQAILSFAPYGHYWREMRRIANQELLSTRRIELSSHLRVSELESSIKALYKLWADEKHDEDGNDNENSGYVAVEMKNWFGELMLNIVLRVVAGKRCFGGSGEEEEAERFLKTMREFMRQLGLFVVGDAVPWLRWLDLGGHEKAMKETAKEMDAIMVEWLEEHRRKRANSDQDAVDQDFMDVMLSILDGTQLAGFDSDTIIKATTWILMGGSIDTASGTLVWILSCMLNNKATIEQAQIELDIHVGKERIVRETDISKLVYIQAIVKETLRLYPTAIFSGPREFTDDCFVNGYYIPKGTQLITNLWKIHTDPSIWSDPLDFKPERFLTTHKDVDVRGNHFELMPFGSGRRMCPGLSFALPMIHLTVATFLQCFEISKPSNEPVDMTEIFGLTTMKATPLDVLIKPRLSSRLYGLS 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211483g00041 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Stsc211483g00041 525 Gene3D Cytochrome P450 22 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00041 525 PANTHER CYTOCHROME P450 82C3-RELATED 9 522 - -
Stsc211483g00041 525 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00041 525 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00041 525 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00041 525 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00041 525 SUPERFAMILY Cytochrome P450 37 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00041 525 FunFam Cytochrome P450 82C4 22 514 - -
Stsc211483g00041 525 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00041 525 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00041 525 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00041 525 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00041 525 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00041 525 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00041 525 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00041 525 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00041 525 Pfam Cytochrome P450 35 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00041 525 CDD CYP82 65 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211483g00041 Stsc-Chr211483 197687 199838 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211483g00041 3 522 Cytochrome P450 AT4G31940 46.503 6.88e-171 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211483g00041 - - qsu:112023929 630.172