Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211483g00040 ATGATGATGATGATTGAGTATCAAGAAGCAGCAGTAGCAGCAGTTGTTGGCGTACTAATCATATCATACTATTTCTACTTCATCAAAACCTCACGTCACCATGCTCACAGGCCACAACCACCGCCTGAGGCAGCGGGTGGCTGGCCACTAATCGGCCACCTGAAGATCTTTAGCTCCGATCAGCCACCTTATGTTACCCTTGGAGACATGGCAGACAAGTACGGACCAATATTCAGAATAAGAATCGGTGTGCACCCTGCCATAGTTGTGAGTTCTTCAGAGCTAGCCAGAGAGTTATTCACCACGCATGATGTCATAGTTTCTTCTCGTCCAAAATATACCGCCGCAAAAATTCTTGGACAAAACTATGCCAATTTCGGTTTCGGTCCCTACAGCAATTACTGTCGTGAGATGCGAAAGATAACGGCCTCGGAGTTACTCTCCACTCGCCGGTTCGAGTTGCTTCGTGACATCAGAGATTCAGAGGTGGAGTTGTCCATCAAAGAGATATACAGAAGGTGGTTGGAGGAAAGAGAAGGTTCTAGAGGGTTGTTATTGGAGATGAAGAAGTGGTTGGGAGACATGAACCTGAACGTGATTCTGAGGATGGTTGCGGGGAAGAGATACTCAACGAAAGGCGGCGATGAGCAGCAGGTGAGGCGGATGAGGTGGGCGTTCAGGGAGTTCTTTCGTCTTACCGGAGTGGTGGTGATCGGAGATGCGATTCCTGCTCTTGGGTGGGTTGACTTTGGTGGTAAGATAAAGGAGATGGAGAAGGCTGCTAAGGAATTGGACGAGATAGTTAGTGAGTGGATTGAAGAACACAAAGAGAACAGAGACTCTGGTGTGACAAAAACAGAACAGGATTTTATTGATGTGTTGCTTTCTATCCTTGATGGGGTTGATCTTGCTGGCTATGATACTGACACTGTCAACAAAGCTACTTGCTTGACACTAATTGCAGGGGCAACAGACACAACAACAGTTACCATTACATGGACACTTTCGTTATTACTGAACCATCGCCATGTTCTGAAGAAAGTTCAAGATGAACTAGACGAGAAAGTAGGCAAGGAGAGACTAGTGAAGGAATCAGATATGAACAAACTAACATACCTTGAAGCAGTGGTGAAAGAATCAATGCGATTATACCCGGCTGGGCCACTATCAGGGCTTCGTATATTCTCAGAGGACTGTACCTTAGGGGGATACCATATCAAGCAAGGTACACGATTGTTCTTGAATCTTTGGAAGCTTCACAGAGATCCTCGCGTATGGTCGGATCCATTGGAATTCAAGCCAGAGAGGTTTCTAAGCACACACAAGGATGTGGATGTGAAGGGTCAGAATTTCGAGCTTCTTCCGTTTGGCGGCGGAAGAAGGTCGTGTCCTGGCATAACATTTGGGCTGCAAATGACGAAATTGGCATTGGCTGCGTTCTTGCATGCATTTGAAGTCACAACTCCCTCCAATGATCCTGTTGATATGAGTGCTACGTTTGGACTCACAATCATCAAAACCACACCGCTTGAGATTTTGGTCAAACCTCGCTTATCACCTTCTTTGATCTTTTATCAGTAA 1581 0.4605 MMMMIEYQEAAVAAVVGVLIISYYFYFIKTSRHHAHRPQPPPEAAGGWPLIGHLKIFSSDQPPYVTLGDMADKYGPIFRIRIGVHPAIVVSSSELARELFTTHDVIVSSRPKYTAAKILGQNYANFGFGPYSNYCREMRKITASELLSTRRFELLRDIRDSEVELSIKEIYRRWLEEREGSRGLLLEMKKWLGDMNLNVILRMVAGKRYSTKGGDEQQVRRMRWAFREFFRLTGVVVIGDAIPALGWVDFGGKIKEMEKAAKELDEIVSEWIEEHKENRDSGVTKTEQDFIDVLLSILDGVDLAGYDTDTVNKATCLTLIAGATDTTTVTITWTLSLLLNHRHVLKKVQDELDEKVGKERLVKESDMNKLTYLEAVVKESMRLYPAGPLSGLRIFSEDCTLGGYHIKQGTRLFLNLWKLHRDPRVWSDPLEFKPERFLSTHKDVDVKGQNFELLPFGGGRRSCPGITFGLQMTKLALAAFLHAFEVTTPSNDPVDMSATFGLTIIKTTPLEILVKPRLSPSLIFYQ 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211483g00040 526 Coils Coil 254 274 - -
Stsc211483g00040 526 FunFam Cytochrome P450 82C4 31 515 - -
Stsc211483g00040 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Stsc211483g00040 526 Gene3D Cytochrome P450 34 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00040 526 Pfam Cytochrome P450 45 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00040 526 CDD CYP82 75 517 - -
Stsc211483g00040 526 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00040 526 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00040 526 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00040 526 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00040 526 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00040 526 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00040 526 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00040 526 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00040 526 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00040 526 SUPERFAMILY Cytochrome P450 46 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00040 526 PANTHER CYTOCHROME P450 82C3-RELATED 20 520 - -
Stsc211483g00040 526 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00040 526 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00040 526 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211483g00040 Stsc-Chr211483 194296 196766 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211483g00040 42 523 Cytochrome P450 AT4G31940 47.967 7.00e-170 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211483g00040 - - adu:107460439 794.267