Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211483g00037 ATGCAGGCACTTATACTTGGTGGGAGTGATACCACAGCAGGGACACTAACTTGGGCAATGTCTTTACTCCTAAACAACCCTCATGCATTAAGAAAGGCACAAGAAGAATTGGACCTGCATGTTGGTAAGGAAAGGCAAGTTGAGGACTCAGACATTAGAAATCTTAAATACATTGAAGCCATTATTAAGGAAACCCTGAGGCTCTACCCAGCTGGTCCACTCCTGGGCCCAAGGGAAGCCCAAGAAGATTGCAACGTTGCTGGTTATCATGTGCCAGCTGGCACACGCTTGGTGGTTAACTTGTGGAAGATTCATAGGGATCCAAGGATTTGGGACGACCCTTGTTCATTTCAACCGGAGAGGTTTCTCTCTGGCCATGATGCTGCTGCTATTGATGTTAGAGGCCAAAACTTTGAACTTATTCCTTTTGGATCTGGGAGAAGGTCATGCCCTGGCATGTCCTTTGCACTCCAATTTCTTCACTTGGCGCTTGCTCGTCTGCTTCATGCATTTGATTTTGCAACTTTGTCCAACGAGCCAGTTGATATGAGTGAGAGTCCAGGATTAACCATTCCTAAGGCAACTCCATTGGAGATTCTGATTACTCCCCGTCTTCAACCACAACTATATGCCTAG 636 0.4623 MQALILGGSDTTAGTLTWAMSLLLNNPHALRKAQEELDLHVGKERQVEDSDIRNLKYIEAIIKETLRLYPAGPLLGPREAQEDCNVAGYHVPAGTRLVVNLWKIHRDPRIWDDPCSFQPERFLSGHDAAAIDVRGQNFELIPFGSGRRSCPGMSFALQFLHLALARLLHAFDFATLSNEPVDMSESPGLTIPKATPLEILITPRLQPQLYA 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211483g00037 211 Pfam Cytochrome P450 4 193 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00037 211 Gene3D Cytochrome P450 1 207 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00037 211 PRINTS P450 superfamily signature 150 161 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00037 211 PRINTS P450 superfamily signature 60 71 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00037 211 PRINTS P450 superfamily signature 7 24 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00037 211 PRINTS P450 superfamily signature 141 150 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00037 211 PRINTS E-class P450 group I signature 100 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00037 211 PRINTS E-class P450 group I signature 59 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00037 211 PRINTS E-class P450 group I signature 16 42 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00037 211 PRINTS E-class P450 group I signature 140 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00037 211 PRINTS E-class P450 group I signature 150 173 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211483g00037 211 FunFam Uncharacterized protein 1 206 - -
Stsc211483g00037 211 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 143 152 IPR017972 GO:0005506|GO:0016705
Stsc211483g00037 211 PANTHER CYTOCHROME P450 82C3-RELATED 3 210 - -
Stsc211483g00037 211 SUPERFAMILY Cytochrome P450 3 204 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211483g00037 Stsc-Chr211483 187938 188651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211483g00037 3 211 Cytochrome P450 AT4G31940 70.335 4.35e-110 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211483g00037 K23136 - gmx:100811993 340.502