Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211483g00036 ATGAAAACAACTACTACTTCCACTGCAATGCCAATGCAAATGCAAAGCTTTTCATCACCATTGGTGGAGCCAGACCTCTCCTTAAACATTAGCACTCCTTTCCTTTCAGCCAAAGATATGTGCTCCTCAATCTCTGATTCAGGTAGCAGTGGAAGCGATTCAAGCCATGATAAAAACAATTGCTTCACTGTCCCACAACCTACTACATTGGGCTTATTAGGCTCTTCTGCACCTGCAGCAAACTTGAATCATCATCTCCATCATCAGCATCCATCAGTATTGATGCAGGGGCTCTCATCAAGAAACTATTTCAATAATCGTCATCTTCATCTTCAGCAACCTCATCAAATCCATTGCCGCCCCGATTTCAAACGAAATGGCGGCGGCGGCAGAAGAAGCATGAGAGCTCCCAGAATGAGATGGACTACCACACTCCATGCTCATTTTGTTCATGCTGTTCAGCTTCTTGGCGGCCATGAAAGGGCAACTCCGAAGTCAGTTTTAGAGTTAATGAATGTTAAGGATCTAACCCTAGCTCACGTCAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGTACCACTGCTGACAGAGTCACAGGTAATAGTCACAACGCAGATATGGGGTTGTTCGGGCAGCAGCAAAGGCAAGAGGTCATGGTGGATCATCTGCATTATACTCAGGGAGACCTTCTCCACCACCACCCACTTCTGCAACTGCAACAATCCCACAGGTCATCATGTCAATCACCACTACTAGAAACAAATACAAATATTACTCGACAAAAACCCGATATCAGCTTCCTCTATTCTCATCTCCAAGATGGTAATGAAATCATGAATAATCATGAAGGAAGGTTGTCGACGAATTACTTGAAGATGAAGGAGAGGTTGGATTATAGCAATTTGTCGTCAGATTCGGAAGGCATTGATCTTGATCTGGAATTCACTCTTGGAAGGCCAAAAACCATCGGGCCAAATCATCAACAGAGTTAA 996 0.4398 MKTTTTSTAMPMQMQSFSSPLVEPDLSLNISTPFLSAKDMCSSISDSGSSGSDSSHDKNNCFTVPQPTTLGLLGSSAPAANLNHHLHHQHPSVLMQGLSSRNYFNNRHLHLQQPHQIHCRPDFKRNGGGGRRSMRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTTADRVTGNSHNADMGLFGQQQRQEVMVDHLHYTQGDLLHHHPLLQLQQSHRSSCQSPLLETNTNITRQKPDISFLYSHLQDGNEIMNNHEGRLSTNYLKMKERLDYSNLSSDSEGIDLDLEFTLGRPKTIGPNHQQS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211483g00036 331 NCBIfam myb-like DNA-binding domain, SHAQKYF class 137 190 IPR006447 GO:0003677
Stsc211483g00036 331 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 14 323 IPR044847 GO:0000976|GO:0006355|GO:0010158
Stsc211483g00036 331 Gene3D - 136 193 - -
Stsc211483g00036 331 Pfam Myb-like DNA-binding domain 138 189 IPR001005 -
Stsc211483g00036 331 FunFam Myb family transcription factor 135 193 - -
Stsc211483g00036 331 MobiDBLite consensus disorder prediction 42 62 - -
Stsc211483g00036 331 SUPERFAMILY Homeodomain-like 134 191 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211483g00036 Stsc-Chr211483 182155 184885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211483g00036 107 194 G2-like Transcription Factor Family AT5G42630 78.022 4.92e-39 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Stsc211483g00036 Myb_DNA-binding 1.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211483g00036 - - gmx:100778242 209.534