Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211483g00022 ATGAAGGAGATGGATAGTGATATCGTAAATAGAAGAGCAGTAGTAGTGTTTGTTGTTGTGATAGCGTGTGCAATTGCAGGTAGCAGCGAGGGAAGAAGCATATTGGTTGGAGGGTCTCAAGGGTGGCGTGCTGGCACCAACTACACCCAATGGACCATACAAAATACCCCCTTCCACATCAATGACACATTAGTGTTCAAGTATCCAGCACCAAACAATACTACAGCGGCGCAGAGCGTGTACGAGGTGACAAACATGTGGTGCTACACAACGTGCGAGTTCAGGGGAGCAAAGCTGCTGGGGAACACCCATGAAGGTGGGGGAGAGGGATTCAAGGTCAAACTAAATGAATGGAGGCCTTACTACTTTGCCTCTCCAGAAAACGGTGCTAGTGACTGCATTGCTGGCCTCACCAAGTTCATTGCCATACCAACTCCATATACATCACACCACCACACCACCACTTTCAATCCCTAG 477 0.4864 MKEMDSDIVNRRAVVVFVVVIACAIAGSSEGRSILVGGSQGWRAGTNYTQWTIQNTPFHINDTLVFKYPAPNNTTAAQSVYEVTNMWCYTTCEFRGAKLLGNTHEGGGEGFKVKLNEWRPYYFASPENGASDCIAGLTKFIAIPTPYTSHHHTTTFNP 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211483g00022 158 SUPERFAMILY Cupredoxins 32 141 IPR008972 -
Stsc211483g00022 158 ProSiteProfiles Phytocyanin domain profile. 32 146 IPR003245 GO:0009055
Stsc211483g00022 158 Pfam Plastocyanin-like domain 42 136 IPR003245 GO:0009055
Stsc211483g00022 158 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Stsc211483g00022 158 Gene3D - 30 144 IPR008972 -
Stsc211483g00022 158 PANTHER GLYCINE-RICH PROTEIN-LIKE 30 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211483g00022 Stsc-Chr211483 129804 130706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211483g00022 9 146 Phytocyanin Superfamily AT5G57920 30.345 1.58e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211483g00022 - - lang:109342628 187.578