Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211483g00007 ATGTTTGGTCATGGTGGACACCATAGAGTTCCTCTTGCGGTGCTGCTGAAGCGTGAATTGGTGAGCGAGAAAATCGAGAAGCCGGAGATTGTGTACGGCCAAGCCAGCCAGAGCAAGAAAGGAGAGGATTTCATTTTGCTCAAGAACGAATGCCAGAGAGTCATGGGAGATGGCGTTTCCACATTCTCTGTTTTTGGGCTATTTGATGGTCACAATGGAACTGCTGCTGCTATTTATGCCAAGGAGAATCTTCTAAACAACGTTTTAAGTGCAATTCCTTCAGATCTTAACAGAGATGAGTGGATAGCAGCATTGCCCAGGGCTTTGGTTGCAGGATTTGTGAAAACTGACAAGGATTTTCAACTGAAAGCAAAAACATCGGGAACAACTGTAACCTTTGTGGTTATTGAAGGATGGGTGGTAACAGTTGCATCAGTAGGTGATTCGCGTTGCATACTTGAACCTTCAGAAGGTGGGATTCATTACTTGTCAGCGGACCATAGACTTGAAACCAATGCAGAAGAGAGGGTTCGAATAACCTGCAGTGGGGGTGAGGTTGGTCGGCTAAATACAGGTGGAGGAGCAGAGGTTGGGCCTTTGAGATGTTGGCCTGGTGGTTTGTGTCTTTCGAGATCCATTGGTGATATGGATGTTGGTGAATTTATTGTTCCTGTACCACACGTAAAGCAAGTGAAGCTGTCTAGTGCCGGAGGAAGAATTGTTATCAGCAGTGATGGTGTCTGGGATGCTCTATCTCCAGAAATGGCCCTAGATTGTTGTCGTGGTATGTCAGCAGAGGCCGCAGCACCACATATTGTGAATGAAGCTTTACAAGCAAAGGGTCTTAGAGATGACACAACCTGCATTGTTGTTGATATGTTACCCCAGGAACAACCACATACTACTGTACGGACACATAAGAAACCGATGAAAGGAATTATGAAGATCTTCCGCAAAAAGAGCTCTGAATCATCATCTCATGCCAACAAGGAATATGTAGAGCCAGATATTGTGCGGGAGCTCTATGAGGAAGGATCTGCTATGCTTTCAGACAGCAATGGTGGTTCCCTTCTGCGATCAAGAGTGCTTCTCAGAATACGGATTTATTTGAGATTACTCATCAAAATCCATGATGGGGTTCTCACTTATTTTCAGTGCATCAAGGTGACGAGACTAGCGAACTGTAGCTACTTGCTTGAGGATTTCTGA 1209 0.4508 MFGHGGHHRVPLAVLLKRELVSEKIEKPEIVYGQASQSKKGEDFILLKNECQRVMGDGVSTFSVFGLFDGHNGTAAAIYAKENLLNNVLSAIPSDLNRDEWIAALPRALVAGFVKTDKDFQLKAKTSGTTVTFVVIEGWVVTVASVGDSRCILEPSEGGIHYLSADHRLETNAEERVRITCSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDVGEFIVPVPHVKQVKLSSAGGRIVISSDGVWDALSPEMALDCCRGMSAEAAAPHIVNEALQAKGLRDDTTCIVVDMLPQEQPHTTVRTHKKPMKGIMKIFRKKSSESSSHANKEYVEPDIVRELYEEGSAMLSDSNGGSLLRSRVLLRIRIYLRLLIKIHDGVLTYFQCIKVTRLANCSYLLEDF 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211483g00007 402 ProSiteProfiles PPM-type phosphatase domain profile. 31 293 IPR001932 -
Stsc211483g00007 402 CDD PP2Cc 39 292 IPR001932 -
Stsc211483g00007 402 SMART PP2C_4 21 291 IPR001932 -
Stsc211483g00007 402 Pfam Protein phosphatase 2C 42 283 IPR001932 -
Stsc211483g00007 402 Gene3D - 31 302 IPR036457 -
Stsc211483g00007 402 FunFam probable protein phosphatase 2C 12 32 299 - -
Stsc211483g00007 402 PANTHER PROTEIN PHOSPHATASE 32 292 IPR015655 GO:0004722|GO:0006470
Stsc211483g00007 402 SUPERFAMILY PP2C-like 37 293 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211483g00007 Stsc-Chr211483 33862 37147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211483g00007 1 351 PP2C-type Phosphatase Gene Family AT1G47380 75.568 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211483g00007 - - gmx:100796959 588.956