Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211481g00019 ATGAGAGAGAAAAAGTGTTCCTTCCGAGGGGAAGCACTTGGAAGAGTCCGAGGGCTGGATCCGAAGAAGGGGATTTTGCATGATTGGGACGACAAAGAATGCATTGAAACATTGAAGAAAAGCAAGGATGCAATTATGGGCAAAGGCAAAGAAGGGAAATTGATCATCATAGAAATGGTGATTGATGAGGATGAGAATGAAGATCCTGAATTATTGGAAACACAACACTTCTTTGACTTGCTGATGATGGTTATGGCTGCTGGAAAAGAGAGAACTGAAAAAGAATGGGCCAAGTTGTTCTTCACTGCCGGATTCAGTGATTATAAGATAATTCCAATTTTAGGTGTTTATTTATTTATAAAAAATTCGGAAATGGAAAAGAAGGCATGCCAAGATGTGAGGGTCCCTCGTCCTTTGGATGCGGTTGAGACCCGCCTCTATGGCTGGGTTGAGGAGGCCGTGCTGACCCAACCTTCCTTGGTTGGGAGCGACTCGCTGCCTGAGTTCCGCCACAACTACCCGCTGATGGAGGATTCAGGGGCGGAGGGGGACTATGTGTTGGAGGCCGCTGGGCCATCCGATCGCGTTCCTTTCCGGGCGGGCGAGGATGGACCCCACTTCCTGTGGGTGTATCAAGAGTTGTTCACTCGTCTGAGGATGTGGCTCCCATTCTCAGACTTTCAACGGGACGTGATGACTTGCTGTCGCGTCGTCGTCAGCCAACTACATCTGAATGGGTGGGGCTTCATCTTGCCTTCGAGAAAGTGTGCTTGCACTACGGCTTCCGTCCCACCATCAGACTCTTCTTCTATATTTATGATGTCCATTTCCCTCCGGGCGGTTACGGGTATAACTCCTTCCGGGCACGTCAGGGCCAGAGGCTGTTTGATTCCTATGAAGATTCGATCCAGGAATTCAAATGGCATTAATTTAAGGTTTTGGCTGCTTCCGGAAAGCGAGCCTTCTGGCTGA 972 0.4897 MREKKCSFRGEALGRVRGLDPKKGILHDWDDKECIETLKKSKDAIMGKGKEGKLIIIEMVIDEDENEDPELLETQHFFDLLMMVMAAGKERTEKEWAKLFFTAGFSDYKIIPILGVYLFIKNSEMEKKACQDVRVPRPLDAVETRLYGWVEEAVLTQPSLVGSDSLPEFRHNYPLMEDSGAEGDYVLEAAGPSDRVPFRAGEDGPHFLWVYQELFTRLRMWLPFSDFQRDVMTCCRVVVSQLHLNGWGFILPSRKCACTTASVPPSDSSSIFMMSISLRAVTGITPSGHVRARGCLIPMKIRSRNSNGINLRFWLLPESEPSG 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211481g00019 323 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 24 117 IPR029063 -
Stsc211481g00019 323 PANTHER O-METHYLTRANSFERASE 23 109 IPR016461 GO:0008168
Stsc211481g00019 323 Pfam O-methyltransferase domain 24 106 IPR001077 GO:0008171
Stsc211481g00019 323 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 124 IPR016461 GO:0008168
Stsc211481g00019 323 Gene3D Vaccinia Virus protein VP39 22 122 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211481g00019 Stsc-Chr211481 91683 94000 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211481g00019 23 119 Monolignol Biosynthesis Gene Families AT1G51990 39.796 4.43e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211481g00019 - - ahf:112762995 159.073