Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211481g00015 ATGCCATTCGAAACCGAACATGGGATCATGTTTTGGGATTATGCTAGCCGAGTGCCTAAGCTTAATCTCTTGTTCAATGATGTCATGGCGAGAGATGCTGCGTTGGTGAGTAGTTTGTTGCTTGGAGATGAAAAGTGGAAGGGAATGTTTGAGGGATTGCAATCGTTGGTTGATGTTGGTGGAGGAACTGGGACTATGACAAGGGCAATTGCCAAATCATTTCCAGAGATGAGTTGTGTTGTATTTGATCTTCCACATGTTGTTGCTGGCTTCCAAGGAAATGATGATGAGAATCTAAAATACGTTGGAGGGAACATGTTTGAAGCCATTCCTCCATGTGACGCCATTTTGTTGAAGCGGTTGAGTTATAAAATTATCCTTATAAAGAAAGAGAAGAAAGTTATTATTGCCCAACTCAGTTCACGAGGAGTAGGTCGCTATTGTAGATATGTATTGGTTAGGTGTTAA 468 0.4124 MPFETEHGIMFWDYASRVPKLNLLFNDVMARDAALVSSLLLGDEKWKGMFEGLQSLVDVGGGTGTMTRAIAKSFPEMSCVVFDLPHVVAGFQGNDDENLKYVGGNMFEAIPPCDAILLKRLSYKIILIKKEKKVIIAQLSSRGVGRYCRYVLVRC 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211481g00015 155 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 120 IPR029063 -
Stsc211481g00015 155 Gene3D Vaccinia Virus protein VP39 1 137 IPR029063 -
Stsc211481g00015 155 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 155 IPR016461 GO:0008168
Stsc211481g00015 155 Pfam O-methyltransferase domain 2 122 IPR001077 GO:0008171
Stsc211481g00015 155 PANTHER O-METHYLTRANSFERASE 2 127 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211481g00015 Stsc-Chr211481 78156 78724 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211481g00015 1 123 Monolignol Biosynthesis Gene Families AT5G54160 35.772 8.19e-21 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211481g00015 - - aip:107609507 167.548