Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211480g00027 ATGGAAAGCAGCAGCGGGAAACGCGATGAAATCGTCGACGTTGGATCGGTTGTTGAAGCCGTTACTGCGGAGGAAGGTGACGCTCCTCTCTACAACGTCGAGAGCCTCTGCATGCGTTGCGGTGAAAATGGGATTACAAGGTTCTTACTCACCTTAATTCCTCACTTCAGAAAGATTTTGCTGTCAGCTTTTGATTGTCCTCACTGTGGTGAGAGGAACAATGAAGTACAGTTCGCTGGGGAAATTCAACCACGCGGTTGCTGTTACACTCTGCAGATTCCAGCTGGCAATCCAAAGATGCTCGACCGACAAGTGGTAAAATCAGAATCTGCTACCATTAAGATTCCAGAGTTGGATTTTGAGATTCCACCAGAGGCTCAGCGTGGTAGTCTTTCAACGGTGGAAGGAATACTAATGCGGGCTGCTGATGAGCTTCAGGCCCTTCAAGAGGAGCGCAGGAAAGTGTCTCCAGAGACAGCTGAAGCCATTGATCAGTTCTTGGTGAAATTGCGAGCCTGTGCTACTGGAGAGTCAGCCTTCACATTTATTCTTGATGATCCTGCTGGAAACAGCTTTGTTGAAAACCCACAGCTTGGTGCCTCCATTTAG 609 0.4844 MESSSGKRDEIVDVGSVVEAVTAEEGDAPLYNVESLCMRCGENGITRFLLTLIPHFRKILLSAFDCPHCGERNNEVQFAGEIQPRGCCYTLQIPAGNPKMLDRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILMRAADELQALQEERRKVSPETAEAIDQFLVKLRACATGESAFTFILDDPAGNSFVENPQLGASI 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211480g00027 202 Coils Coil 131 151 - -
Stsc211480g00027 202 PANTHER ZINC FINGER PROTEIN ZPR1 16 197 IPR040141 -
Stsc211480g00027 202 Pfam ZPR1 zinc-finger domain 35 194 IPR004457 GO:0008270
Stsc211480g00027 202 FunFam Zinc finger protein ZPR1 25 80 - -
Stsc211480g00027 202 Gene3D ZPR1, zinc finger domain 27 80 IPR042452 -
Stsc211480g00027 202 Gene3D ZPR1, A/B domain 81 201 IPR042451 -
Stsc211480g00027 202 SMART zpr1 35 195 IPR004457 GO:0008270
Stsc211480g00027 202 NCBIfam ZPR1 zinc finger domain 37 197 IPR004457 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211480g00027 Stsc-Chr211480 167005 170027 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211480g00027 7 197 C2H2 Transcription Factor Family AT5G22480 80.208 4.95e-110 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211480g00027 K06874 - cave:132181934 343.199