Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211480g00023 ATGCAAGCAGCAATTGACATCGAGAAAGTGATGGATATCTCACTCACTCAGATTGTTGAAGAAGAAAACCTACCTCCAGGCTCTAATTACGCTCTGTTTTCTAAAGAATTCTTTCGGAGACATGGTTGTGATCTCTTTGCTTGCGCTTTTAATTGGTTTCTGGTGGATACTGTTTTCTACAGCAGCATCCTATTCCAATCTCAAATATACAAAATCGAAAACATAGATAAGGTGGACGTGTACCAAGAAGCCATTGATATCGCTACGCTCCAAGCAAAAATTGTTGTGTGTTCCACCATCCCGGGCTACTTCTTCTCGGCCTATTTCATCGACCGTGTCGGAAGAGTTAGGATCCAAATGATGGGTTTCTTCTTCATGGCATTGGCATTTTTCGCCATAGGGATTAGGTATGATTCATACTGGACCAAGAAAAGTCACAAATATGGTTTCTTGGTCCTGTATGGTGTTGCTTTCTTTTTTGCTAATTTTGGACCCAACACCACGACATTTATAGTCCCGGCAGAGCTTTTCCCGGCTAGGTTTAGGTCAACGTGTAACGGCATATCTGGTGCAGCTGGCAAGATTGGTGCAATCGTCGGATCGGTGGGGTTTCTTTGGGCGTCTCATGGCAAGAATGAGGATCGAGAGGGGTTTCCTCATTCTGTAGGAATTGGAATGAATGCATCATTGTGCATACTTGGAGGAGTGTGCTTGGTGGGTTTTGTTGTCACCACTTTTTTCACCAAAGAAACTATGGGAAGGTCTTTGGAAGATAATGAGACTGAGCCTCTAGAAACTGAAGAAATGAATGATCTTTGA 819 0.431 MQAAIDIEKVMDISLTQIVEEENLPPGSNYALFSKEFFRRHGCDLFACAFNWFLVDTVFYSSILFQSQIYKIENIDKVDVYQEAIDIATLQAKIVVCSTIPGYFFSAYFIDRVGRVRIQMMGFFFMALAFFAIGIRYDSYWTKKSHKYGFLVLYGVAFFFANFGPNTTTFIVPAELFPARFRSTCNGISGAAGKIGAIVGSVGFLWASHGKNEDREGFPHSVGIGMNASLCILGGVCLVGFVVTTFFTKETMGRSLEDNETEPLETEEMNDL 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211480g00023 272 Pfam Sugar (and other) transporter 83 260 IPR005828 GO:0016020|GO:0022857|GO:0055085
Stsc211480g00023 272 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 2 257 - -
Stsc211480g00023 272 Gene3D MFS general substrate transporter like domains 24 271 IPR036259 -
Stsc211480g00023 272 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 252 IPR020846 GO:0022857
Stsc211480g00023 272 SUPERFAMILY MFS general substrate transporter 30 260 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211480g00023 Stsc-Chr211480 143315 144133 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211480g00023 1 267 Inorganic Solute Cotransporters AT1G76430 56.318 7.15e-103 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211480g00023 K08176 - gmx:100803834 344.739