Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211480g00020 ATGGCGAGGAAGAAGTTGAAGGTGCTCTCAGCCCTTGATACAGCAAAGACACAATACTATCACTTCAAGGCTATTATAGTTGCTGGGATGGGTCTCTTCACCGATTCCTACGACCTCTTCTCCATCACCCTCGTCACCAAAATGATCGGAAGGGTCTACTATGCCGACCACAACGACCTCGCTGACAAAAAGTTATATGTTACCCCGCCTGTGGTAGCTGCCTTGGTGGCCGTTGCCTTAGTGGGGACGGCCATTGGGCAACTTGTGTTCGGCAGACTCGGCGATCTTAGAGGTCGTCGCCCAGTATACGGACTCGCTTTGTTGCTCATGGTGTTTGGCTCCTTGGGAAGTGGTTTCTCCATTTGTGTCAAACGAACATGTGTTCTAGTCAGTTTAGGTCTCTTCAGGTTCTTATTGGGGCTAGGGATTGGAGGAGACTACCCTCTATCATCAACAATCATGTCTGAATTTGCCAATAAAAAGACAAGAGGCTCTTTTATAGCGGCGGTTTTCTCAATGCAGGGTTTTGGCATTTTGGCAAGTGCCACCGTGACTATAGTGGTGTCTGCCATATTCCGCCTCGCCCCGGACGCCAAAGAGAAACAACATACTGCGGCGGCGGCCGACTTCGCGTGGAGGTTGATCCTCATGTTGGGGTCAGTCCCGGCGGCATTGACTTACTACTGGAGAATTATGATGCCTGAAACTGCCAGGTACACAGCATTAGTGGAACATAATGTGATGCAAGCAGCAAAGGACATGGAGAAAGTGATGGACATCTCACTCACCCAAATCATCGAAGAAAATTTACCACCTTCACCAGTCTCATCACATTCCGACGACTACTCGCTCTTCTCGAAGGAGTTCCTCCGCCGCCACGGCCGCGACCTCTTTGCTTGTTCCATCAATTGGTTTTTGGTGGACATTGTGTTCTACAGCAGCATCCTCTTCCAATCTCATATATACTCCATCAAACTCAAAAACAAACAAGAGCTTGATGTTTATCAAGAAGCCTTTGACATTGCCAGGCTCCAAGCAATCATTGCTGTATGTTCCACCATCCCCGGTTATTTCTTCTCGGTGTATTTCATCGACCGGATCGGAAGAGTTAAGATCCAAATGATGGGTTTCTTCTTCATGGCATTGGCATTCTTCGCCATGGGAATTCCTTATTATTCATTTTGGACTGCGGAAAAGGATGGCAAGCCTAACAAGTCTAGGAATAACGGTTTCTTGGTCCTCTATGGGGTCGCTTTCTTCTTCGCGAACTTTGGACCCAACACCACCACTTTTATCGTCCCGGCCGAGCTTTTCCCGGCGAGGTTTAGGTCGACATGTCATGGAATTTCGGGAGCGTTTGGGAAGATTGGGGCAATTATTGGATCCGTAGGGTTTCTTTGGGCTTCTCGGGACGAGAAGGAACAAGACAAAGATGGATATGGAGTGAAAGGAATTGGAAAGGTAGCTTCCTTGTGTATGCTTGGAGGGGTTTGCTTAGTGGGTGTGGCTACCACCTTTTTATTTACCAAGGAAACCATGGGAAGGTCCTTGGAAGAAAATGAAACTGAGTGA 1572 0.4803 MARKKLKVLSALDTAKTQYYHFKAIIVAGMGLFTDSYDLFSITLVTKMIGRVYYADHNDLADKKLYVTPPVVAALVAVALVGTAIGQLVFGRLGDLRGRRPVYGLALLLMVFGSLGSGFSICVKRTCVLVSLGLFRFLLGLGIGGDYPLSSTIMSEFANKKTRGSFIAAVFSMQGFGILASATVTIVVSAIFRLAPDAKEKQHTAAAADFAWRLILMLGSVPAALTYYWRIMMPETARYTALVEHNVMQAAKDMEKVMDISLTQIIEENLPPSPVSSHSDDYSLFSKEFLRRHGRDLFACSINWFLVDIVFYSSILFQSHIYSIKLKNKQELDVYQEAFDIARLQAIIAVCSTIPGYFFSVYFIDRIGRVKIQMMGFFFMALAFFAMGIPYYSFWTAEKDGKPNKSRNNGFLVLYGVAFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAFGKIGAIIGSVGFLWASRDEKEQDKDGYGVKGIGKVASLCMLGGVCLVGVATTFLFTKETMGRSLEENETE 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211480g00020 523 ProSitePatterns Sugar transport proteins signature 2. 138 163 IPR005829 GO:0016020|GO:0022857|GO:0055085
Stsc211480g00020 523 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 519 - -
Stsc211480g00020 523 FunFam Inorganic phosphate transporter 1-6 20 523 - -
Stsc211480g00020 523 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 513 IPR020846 GO:0022857
Stsc211480g00020 523 Pfam Sugar (and other) transporter 26 521 IPR005828 GO:0016020|GO:0022857|GO:0055085
Stsc211480g00020 523 SUPERFAMILY MFS general substrate transporter 12 521 IPR036259 -
Stsc211480g00020 523 Gene3D MFS general substrate transporter like domains 270 523 IPR036259 -
Stsc211480g00020 523 Gene3D MFS general substrate transporter like domains 20 266 IPR036259 -
Stsc211480g00020 523 CDD MFS_PhT 25 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211480g00020 Stsc-Chr211480 122388 125402 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211480g00020 5 523 Inorganic Solute Cotransporters AT1G76430 60.491 0.0 631
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211480g00020 K08176 - gmx:100797683 711.835