Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211479g00022 ATGGTGGCCTCTGCACCACATATTCCAGGTGTAACTCATGTGGGCGGCGATGCACTCGAATCTGTACCTAGTGGAGATGCAATCTTCATAAAGTGGGTGCTATTAGCATGGACAGACGAGGAATGCAAGAAGGTTTTTCAGAATTGCTATAAGGCACTCCCAGCGAACGGAAAAGTGATCGCCTGCGAGCCAGTGGCTCCGGAGGTGACGGATGAGAGCCAGAGAACAAGAGCATTGCTTGGTGGAGACATATTCATAATGACAATGTATAGAACAAAGGGGAAGCACAGGACTGAACAACAATTCAAAGAGCTTGCTACTTCTGCTGGCTTTTCTGCTTTCCATGCTTTCTATGTTGATCCTTACATGGCTGTGCTTGAATTTCACAAATGA 393 0.4656 MVASAPHIPGVTHVGGDALESVPSGDAIFIKWVLLAWTDEECKKVFQNCYKALPANGKVIACEPVAPEVTDESQRTRALLGGDIFIMTMYRTKGKHRTEQQFKELATSAGFSAFHAFYVDPYMAVLEFHK 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211479g00022 130 Gene3D Vaccinia Virus protein VP39 2 116 IPR029063 -
Stsc211479g00022 130 PANTHER O-METHYLTRANSFERASE 7 117 IPR016461 GO:0008168
Stsc211479g00022 130 Pfam O-methyltransferase domain 5 112 IPR001077 GO:0008171
Stsc211479g00022 130 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 127 IPR029063 -
Stsc211479g00022 130 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 130 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211479g00022 Stsc-Chr211479 203363 206103 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211479g00022 1 130 Monolignol Biosynthesis Gene Families AT3G53140 68.462 9.68e-66 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211479g00022 - - aprc:113853000 222.246