Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211478g00043 ATGGAGATGGAGTTAATATGCAAAGAAATCATGAAACCAAGTTCAGCAACTCCTCCACACCTCAAAACTTATCCCCTCTCCTACTTTGATGTGACAACTCCTCCCCAATACATGCCAGTGCTTTACTTTTACAACATAAAACAAATTGAAAACCAAGAATCCAAGTTAGCCCTGCTCAAGAAATCCTTACAGGAAGCTCTCTCAGCGTACTACCCAATTGCAGGCAGGTTCAAAGGTCAACTCGCCATTGACTGCAACGACGAAGGAGTGCCATTGCTAATCACAAAACTCAAATGCCATCTCTCAAACTTTCTCAAAAACCCAATCACACCAAACCTTCTTCCTCTCTTCCCGGACAATCTTGCATGGAGCGATATGAACAATCCAGAGCATGATCCCATCATGGCCATTCAAATCAACTGCTTCCAATGCGGCGGATTCGCAATCGCAGTCTGCCTCTCTCACAAGTTCGGCGACGTTTCCACTCTTTTCAACTTCGTCAACCACTGGGCCGCCATCGCCAGCCACCACCAAGATCAGAACAAGCCACTACCTTCTCCGCCCTTACTCGACGCAGGAGTTTCGATTTTTCCTCAAGGAAACCTTCCGGTTTACCGCGAAAAGCCATACTACGCTCTCCCGAAATCGGTGTGCAAGAGGTTCGTGTTCGAAGCTTCCAAGATCGAAGCCCTGAAAGCCATGGCTGGACCAAATCAACCGACAAGGTTTCAAGCGGTGGGAGCACTGATTTATAAGTGTGCGGTTTCTGCACTAAGCCCTAACTCCTCGTTGTTTACCTGCGTTTCCGTGAATCTTCGGAAGAGGATGGATCCTCCTGTTCCTAGCAACACCTTAGGAAACATGGTTTTGTTCTTCATGTTTATGATCTCTGAGAGGGATCAGCCAGCGGAGTTGGTAAGCAAGATGAAAGAGGGGATGATTCGAAATGAGATGGAGTGGAAGAAGTACGGAGGAAAGTACAGGGACTTGGATTTCATTGCTGAGGCACTGAAACGCTGGTCGGATGCACCGCCGCCGGGGGCTTTGAAGTTTCCGATTATTGTACATTCTGGTTGGTGCGGGTTTTCAATGTACGAGGCGGATTTTGGGTGGGGGAAACCGGCGTGGATAGCGTCCGTTACGAATTATGAGAACGGTGTGGTTTGTTTGGATGCGAGAGATGGAAAAGGGATGGAAGTGATTGTGAACATGGAAGAGCAGAACATGGCAAAGTTTGAGTGTAACCAGGAGCTGCTTCAATATGCCTCTCTTGACCCATCTGTTCAACTCTAA 1293 0.4772 MEMELICKEIMKPSSATPPHLKTYPLSYFDVTTPPQYMPVLYFYNIKQIENQESKLALLKKSLQEALSAYYPIAGRFKGQLAIDCNDEGVPLLITKLKCHLSNFLKNPITPNLLPLFPDNLAWSDMNNPEHDPIMAIQINCFQCGGFAIAVCLSHKFGDVSTLFNFVNHWAAIASHHQDQNKPLPSPPLLDAGVSIFPQGNLPVYREKPYYALPKSVCKRFVFEASKIEALKAMAGPNQPTRFQAVGALIYKCAVSALSPNSSLFTCVSVNLRKRMDPPVPSNTLGNMVLFFMFMISERDQPAELVSKMKEGMIRNEMEWKKYGGKYRDLDFIAEALKRWSDAPPPGALKFPIIVHSGWCGFSMYEADFGWGKPAWIASVTNYENGVVCLDARDGKGMEVIVNMEEQNMAKFECNQELLQYASLDPSVQL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211478g00043 430 Gene3D - 1 203 IPR023213 -
Stsc211478g00043 430 Pfam Transferase family 2 418 - -
Stsc211478g00043 430 PANTHER F21J9.9 4 423 - -
Stsc211478g00043 430 Gene3D - 214 422 IPR023213 -
Stsc211478g00043 430 Coils Coil 46 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211478g00043 Stsc-Chr211478 210603 212118 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211478g00043 1 413 Monolignol Biosynthesis Gene Families AT5G48930 22.573 3.71e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211478g00043 - - adu:107481923 691.419