Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211478g00042 ATGAGGTTTCTGGTAATCTTGTTTATGCAGCTCAAAATTCCTCCATTGCCAAATTCTCCAACAAGCAACTATGAAGATGTCCTTCCAATCATGCTCAGGACTACTACTCCATTGATTGTGCAGCTAGAGGGTATCGATACCCTCCTCAAGGGTATCGATACCCTTGACGTCCAAAGAAAAGTTTTCGCTCTTTGGGGACCCTTCCAGCTCCAAATAGTAGTCCAAAAAGTTTTCCTTGGATTAGACCAGTTTGCAAGAGCTCTCTTCCTGTTTAAGATTCGAGCTCAGTTTCTTCATATCCCAGCCACCATTGTCCGTAGTCCATTCCCAAACCAGGCTATTAGTATCAATTCTTTGAGGATCAATGGCCCAGTTCTTGAGAGGACCCAAATCTGTAATCCATTGGGTAGTGTTTGCACCGACGGTGCTCAGTGTTACGTTGGTGGAGCTTGTAAGCGTTCCAGGAGGGCTGAACGACGGCGTCGGCACTACAAGGTGGTTGTGGAGTTGTCGTCTTCTGCGCTGCTTTGGAGGGGGGAGTTTGTCGATGCTAGAAGAAGGTTGTTCACCGCTCTAAGGCTTGACGGAGGAATAATAAGAATGGAGAGAGAATTAATATCAAGAGAGAGCATCAAACCCTCTAAACCTACACCTTCCCACAACAGAATCCATCAACTCTCCTTCATAGACCACATAGTTGCACGAAACTACGTGCCAGCAATTTACTTTTACCCATGCAGCAACAACGATAATAATGCTGCCAGTGCCACCGAAGAAGAAGTAACAACCAAAATATCAATGCTAAAGAAGTCGTTATCCAAAGTTCTAACCATATACTACCCTTTTGCCGGAATCTACAGAGACCAACGATCCATCCATTGCAACGACCAAGGCGTCACATTTATCGTTTCAACCGTTAAAACCAACCTCTCATATGTTCTCAACGACCCCTCCGACTCGCTGCTGAACCCTCTCTTTCCCGATGACCTTCAGTGGAAGGACATGGGTTCACACGCCGCCATATTGGCCATCCAAATCAACCGTTTCGCTTGCGGCGGAATCGCCATCGCCGTCTGCCTTTCGCACAAACTCGGCGACGGTTCCACTCTCTTCAACTTCGTCAATGACTGGGCTACTCTCAACCGAAACAATAATGATCAACTACTTTTCCCGCCAGATCTTGTTGCGGGATCTTCTCTATTCCCGCAAGAGGATTTGCCAGTCTTCCCTGAAATCTCGTTCACGAAGCAAAACACTGTGTGTGCAAGACTCGTGTTCGAGGGTTCCAAGATCGAGTCCCTGAAGGAAACGGCGAAATCCAACGGCGTTGAGAATCCTTCGAGGGTTGAAGTTGTGATTGGAATGATCTACAAGCGCGCCGTTTCTTCTTTGGGGCTTGACGGAAACGGTAACGCGGCGCCACTTTTGCTCGTTGCTGCGAATCTGCGAAGAAGAATGGTTCCTCCGCTTCCGGAGAAGTCCATAGGGAACTGGGTGTGGTCGTTCCCCGTAGTGTCAAAGGAAAAGGAGTTGGTGGAAGAAATGAGGGAAGGTTTATCTGAATTCTGCGAGAAGAGTGTGAAGAAGTTTGGGGATAAAGAATTTGTGATTGAGTTCCTAAGGAAGGCAACTACGGCGAGGAAAAGTCCGATTGGATCGGAGAAGATGAGAGTGTTTTTCTTTGCGAGCTGGTGTAGGGTTCCGACGTATGAGGTGGATTTTGGATGGGGGAAGGCGGCGTGGGTGACGAGTGTTGGGTCTCCGGTGAAGAACAGTGTGGTTTTGATGGATGGGAGAGATGGGAATGGCGTTGAAGCTCTTGTGAGCATGGAGGAGCAAGATTTGGTGCTCTTTCTGCGTGATTACCAGCTCCTTCAATATGCTTCTATTAATCCAAAGGTTCATGTGTGA 1911 0.4772 MRFLVILFMQLKIPPLPNSPTSNYEDVLPIMLRTTTPLIVQLEGIDTLLKGIDTLDVQRKVFALWGPFQLQIVVQKVFLGLDQFARALFLFKIRAQFLHIPATIVRSPFPNQAISINSLRINGPVLERTQICNPLGSVCTDGAQCYVGGACKRSRRAERRRRHYKVVVELSSSALLWRGEFVDARRRLFTALRLDGGIIRMERELISRESIKPSKPTPSHNRIHQLSFIDHIVARNYVPAIYFYPCSNNDNNAASATEEEVTTKISMLKKSLSKVLTIYYPFAGIYRDQRSIHCNDQGVTFIVSTVKTNLSYVLNDPSDSLLNPLFPDDLQWKDMGSHAAILAIQINRFACGGIAIAVCLSHKLGDGSTLFNFVNDWATLNRNNNDQLLFPPDLVAGSSLFPQEDLPVFPEISFTKQNTVCARLVFEGSKIESLKETAKSNGVENPSRVEVVIGMIYKRAVSSLGLDGNGNAAPLLLVAANLRRRMVPPLPEKSIGNWVWSFPVVSKEKELVEEMREGLSEFCEKSVKKFGDKEFVIEFLRKATTARKSPIGSEKMRVFFFASWCRVPTYEVDFGWGKAAWVTSVGSPVKNSVVLMDGRDGNGVEALVSMEEQDLVLFLRDYQLLQYASINPKVHV 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211478g00042 636 Gene3D - 416 628 IPR023213 -
Stsc211478g00042 636 Gene3D - 201 408 IPR023213 -
Stsc211478g00042 636 PANTHER F21J9.9 204 629 - -
Stsc211478g00042 636 Pfam Transferase family 204 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211478g00042 Stsc-Chr211478 201345 209263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211478g00042 211 618 Monolignol Biosynthesis Gene Families AT5G48930 23.341 4.12e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211478g00042 - - gmx:100806928 466.848