Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211477g00043 ATGGCGAAGGAGCAAATGCAAGTTCTGAATGCACTAGATGTGGCAAAAACACAATGGTACCATTTCACAGCAATAGTGATAGCTGGAATGGGGTTCTTCACGGATGCATACGATCTATTCTGCATATCCCTTGTGACGAAGTTGCTAGGGCGCATATACTACCACGTTGATGGTGCGGAAAAGCCTGGTACATTGCCTCCTAACGTAGCAGCTGCTGTAAATGGTGTAGCTTTCTGTGGAACACTTTCAGGACAACTCTTCTTCGGATGGCTTGGAGATAAGTTAGGCCGAAAAAAGGTCTATGGCATGACTCTCATGATGATGGTAATATGCTCCGTTGGTTCTGGCCTTTCCTTTGGGCATAGTCCCAAATCCGTCATGGCAACTCTCTGCTTCTTCCGGTTTTGGCTTGGTTTTGGTATCGGTGGAGATTATCCCCTTTCTGCTACCATAATGTCCGAGTATTCTAACAAGAAGACTCGCGGCGCTTTCATCTCCGCGGTCTTTGCTATGCAAGGTTTTGGAATCCTGGCAGGTGGTATATTTGCAATCATAATTTCAGCTGCATTCAGAGAAAAGTTCAATGCTGCACCCTATGAGGTTGATCCACTTGGTTCAACTGTTCCACAAGCAGATTATGTTTGGAGAATAATTGTCATGGTTGGAGCTCTCCCGGCTGCACTGACTTATTATTGGCGTATGAAGATGCCGGAAACTGCCCGTTACACTGCCTTAGTTGCAAAGAATCAAGAGCAGGCTGCAGCAGATATGTCTAAGGTTCTGCAGGTTGAGATTCAAGCCGAGCCAAGGAAGGAGGAGCAGGAAAAGGCTAAATACTCCTTGTTCTCAAAGGAGTTTCTTAGTCGCCATGGTCTACATCTGCTGGGCACAACAACCACATGGTTCTTGCTTGACATTGCATTTTACAGCCAGAATCTTTTCCAGAAGGATATCTTCAGCGCAGTTGGTTGGATCCCTCCTGCAAAAACCATGAATGCTCTTGAGGAGGTTTACAGAATTGCAAGGGCTCAAACACTTATTGCTCTTTGCAGTACAGTTCCGGGTTATTGGTTTACAGTGGCTTTCATTGACAAGATTGGAAGATTCGCCATCCAATTGATGGGCTTCTTCTTTATGACTGTCTTCATGTTTGCTCTCGCCATTCCTTACGACCACTGGACACACAAGGACAACCACATTGGATTTGTGGTCTTGTATTCCTTAACCTTCTTCTTTGCAAATTTCGGGCCTAATGCCACCACATTTGTAGTGCCGGCCGAGATTTTCCCTGCTCGGTTCCGGTCTACATGCCACGGGATATCATCGGCATCCGGGAAGCTCGGAGCTATCGTTGGAGCATTTGGGTTCTTGTATTTGGCACAAAACAAGGACAAGAGCAAAGCAGATGCAGGGTACCCTGCAGGTATTGGTGTCAAGAATGCACTGATTGTCTTAGGTGTAGTTAACGTTTTAGGCTTCTTCTTTACATTCTTGGTGCCTGAGGCGAAGGGGAAATCTTTGGAGGAGATGTCAGGTGAGAATGAAGAAGAAGAAGTACCACCGGAACTGTCAGAACAGCAACGTTCTTATAGCAACAGAACTGTTCCATATGTTTAG 1617 0.4589 MAKEQMQVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGTLPPNVAAAVNGVAFCGTLSGQLFFGWLGDKLGRKKVYGMTLMMMVICSVGSGLSFGHSPKSVMATLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFISAVFAMQGFGILAGGIFAIIISAAFREKFNAAPYEVDPLGSTVPQADYVWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNQEQAAADMSKVLQVEIQAEPRKEEQEKAKYSLFSKEFLSRHGLHLLGTTTTWFLLDIAFYSQNLFQKDIFSAVGWIPPAKTMNALEEVYRIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQLMGFFFMTVFMFALAIPYDHWTHKDNHIGFVVLYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAIVGAFGFLYLAQNKDKSKADAGYPAGIGVKNALIVLGVVNVLGFFFTFLVPEAKGKSLEEMSGENEEEEVPPELSEQQRSYSNRTVPYV 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211477g00043 538 MobiDBLite consensus disorder prediction 508 538 - -
Stsc211477g00043 538 MobiDBLite consensus disorder prediction 524 538 - -
Stsc211477g00043 538 Pfam Sugar (and other) transporter 25 511 IPR005828 GO:0016020|GO:0022857|GO:0055085
Stsc211477g00043 538 FunFam Inorganic phosphate transporter 1-6 20 524 - -
Stsc211477g00043 538 Gene3D MFS general substrate transporter like domains 20 527 IPR036259 -
Stsc211477g00043 538 CDD MFS_PhT 25 503 - -
Stsc211477g00043 538 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 504 IPR020846 GO:0022857
Stsc211477g00043 538 SUPERFAMILY MFS general substrate transporter 12 511 IPR036259 -
Stsc211477g00043 538 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 502 - -
Stsc211477g00043 538 NCBIfam phosphate:H+ symporter 11 513 IPR004738 GO:0005315|GO:0006817|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211477g00043 Stsc-Chr211477 212269 214882 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211477g00043 1 518 Inorganic Solute Cotransporters AT3G54700 83.784 0.0 921
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211477g00043 K08176 - gmx:100803626 924.85