Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211477g00037 ATGGCTTCTTCAAGTGGAAATGGAACAGGGTCAGGTTCACCATGTGGGGCATGCAAGTTTCTGAGAAGGAAGTGTGCTGCAGATTGCATATTTGCACCATACTTCTGCTCAGAACAAGGGCCTGCAAGATTTGCAGCCATACATAAGATCTTTGGTGCTAGCAACGTTTCCAAGCTCTTGCTTCATATTCCCGCTCATGATCGCTGTGAGGCTGTTGTCACCATTGCTTATGAGGCTCAAGCTCGTATCAGAGACCCCGTTTATGGTTGCGTCTCCCACATTTTCGCCTTACAACAACAGGTAGCATGCTTGCAAGCACAATTGATGCAAGTCAAGGCTCAGCTGGCGGCACAACAGAATCAAATAGAATCTTCTAGGAACATAGAGAACCACCAATGGCCAGGGAATGTTGTTGGTGGAGCCATGAACAGTGATGATAATCCATTTGGTCACACCAATTACATGAACCCGCCTGTATCTCCTCAGAGTTCACTTGAATCAATTGATCATCACAGCAACAGCATCAATGATGGAATAATGGGAAATAATATGCATGACGCAAGACCAGAGGATTTCATCAACTCATCATCATTCCATCAACAAGCTTGTTCTAAGAGAACATCATATAACAACAACACTGAGTTGGGTGAGCTGCAAGAATTGGCACTCAGGATGATGAGGAACTAA 687 0.4469 MASSSGNGTGSGSPCGACKFLRRKCAADCIFAPYFCSEQGPARFAAIHKIFGASNVSKLLLHIPAHDRCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQVKAQLAAQQNQIESSRNIENHQWPGNVVGGAMNSDDNPFGHTNYMNPPVSPQSSLESIDHHSNSINDGIMGNNMHDARPEDFINSSSFHQQACSKRTSYNNNTELGELQELALRMMRN 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211477g00037 228 PANTHER LOB DOMAIN CONTAINING PROTEIN 10 215 - -
Stsc211477g00037 228 MobiDBLite consensus disorder prediction 160 180 - -
Stsc211477g00037 228 Coils Coil 94 128 - -
Stsc211477g00037 228 Pfam Lateral organ boundaries (LOB) domain 14 112 IPR004883 -
Stsc211477g00037 228 ProSiteProfiles LOB domain profile. 13 115 IPR004883 -
Stsc211477g00037 228 MobiDBLite consensus disorder prediction 160 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211477g00037 Stsc-Chr211477 169301 170746 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211477g00037 3 228 AS2 family AT2G42430 55.422 2.48e-80 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc211477g00037 LOB 1.5e-36 No_clan