Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211477g00030 ATGCTTTTGCAACTGCTCTTCTTCTTCCTCCTCCTCCTCCCAGTCCTTCTCTTCTTCCTCACACACACACTCCATCAAAGTGCAACGCCTTCTTACCTCCCAAAGTGTTACCCACTAATTGGTTCCTACTTGGCCTTCAAAGTCAACGCCCACCGCCGCATCCAGTGGCTTTCCGACATACTCCTTTCATCCCCCACCGCCACCTTCACCCTCCAACTCCCCCTCGGCCGCAAAACCATCCTCACCGCCAACCCCGCCAACGTGCAACACATCCTCAACACTCATTTCCATGTTTACCAAAAGGGCCCCACACATTTCGATACTCTATACGATCTCCTCGGTGCCGGAATCTTCAACATCGACGGCCACAAATGGAAGTTCCAGAGGCAAATCGCCATCCACGAGTTCACTACCAAATCGCTCCGCAACTTCGTCCAACACGTGGTCAACGCCGAACTCTCCCATCGCCTCCTGCCTCTTCTATGTTCCGCCGCAGAGCACAAGAAAATCCTTGATTTCCAGGACGTGCTCCAGAGATTCGCCTTTGACAACATCTGCAAAATCGCTTTCGGCTTCGACGCTGAGTACCTTACGCAGTCACCTAATAAGAGAAGCAACTTCGCCGAGGCTTTCGAAGAAGCTTCCATAATCAGCAGCAAACGCTTTCGGGAGCCTTTGCACTTGATTTGGAAGATCAAGAGAATGCTTAACATAGGCTCTGAAAAGCGCTTAAGAATCGCTGTATGTGAGGTTCGCGAGTTTGCCATGAAACTAATAAGAGAGAAGAAGAAGATGATGATGATGGAAAAGACAAGAGAAACAAAATCATCGGATATGCTTTCGCGGTTCTTGAGTTCGGGTCATTCTGAGGTGGAGTTCGTGACGGACATAGTGATAAGCTTCATACTGGCCGGCAAGGACACCACCTCTGCAGCGCTGACGTGGTTCTTCTGGCTGTTAGCGAAGAACCCTCGCGTTGAGAAGGAGATTCTGAGAGAGATAATGGAGAAATCGGAATCTCCGGATTACGATGAAGTGAAGGAGATGGTGTACACGCAGGCCGCTTTGTGCGAGAGCATGAGGCTGTACCCGCCGGTGCCGATGGACACAAAGGAGGCGGCAAGTGACGATGTTTTGCCGGACGGGTCGGTGGTGAAGAAGGGAGTGATGGTGACGTATCATGTTTACGCCATGGGGAGGATGGAGAGCATTTGGGGTGGGGATTGGGCGGAGTTTAGGCCGGAGAGGTGGTTGGAAAGGGTTGAAGGTTTGTGGAGGTTTGTGGGAAAGGATTGTTATAGGTATCCTGTGTTTCAGGGTGGACCAAGGGTGTGCTTGGGGAAGGAAATGGCGATATTGCAGATGAAGAGAGTGGTGGCCGGGGTTTTGAGGCGCTTCAGGGTGGTGCCTGTGCGAGATGGGATGGAGCCGGAGTTCGTTGCGTTTCTGACGGCACAGATGAAAGGTGGTTTCTTTGTCAACATCCAACAAAGACCTCCTTAA 1503 0.5143 MLLQLLFFFLLLLPVLLFFLTHTLHQSATPSYLPKCYPLIGSYLAFKVNAHRRIQWLSDILLSSPTATFTLQLPLGRKTILTANPANVQHILNTHFHVYQKGPTHFDTLYDLLGAGIFNIDGHKWKFQRQIAIHEFTTKSLRNFVQHVVNAELSHRLLPLLCSAAEHKKILDFQDVLQRFAFDNICKIAFGFDAEYLTQSPNKRSNFAEAFEEASIISSKRFREPLHLIWKIKRMLNIGSEKRLRIAVCEVREFAMKLIREKKKMMMMEKTRETKSSDMLSRFLSSGHSEVEFVTDIVISFILAGKDTTSAALTWFFWLLAKNPRVEKEILREIMEKSESPDYDEVKEMVYTQAALCESMRLYPPVPMDTKEAASDDVLPDGSVVKKGVMVTYHVYAMGRMESIWGGDWAEFRPERWLERVEGLWRFVGKDCYRYPVFQGGPRVCLGKEMAILQMKRVVAGVLRRFRVVPVRDGMEPEFVAFLTAQMKGGFFVNIQQRPP 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211477g00030 500 PANTHER CYTOCHROME P450 21 491 - -
Stsc211477g00030 500 Pfam Cytochrome P450 37 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211477g00030 500 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211477g00030 500 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211477g00030 500 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211477g00030 500 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211477g00030 500 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211477g00030 500 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211477g00030 500 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211477g00030 500 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211477g00030 500 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211477g00030 500 CDD CYP86A 68 491 - -
Stsc211477g00030 500 SUPERFAMILY Cytochrome P450 34 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211477g00030 500 Gene3D Cytochrome P450 20 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211477g00030 Stsc-Chr211477 124323 125916 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211477g00030 1 498 Cytochrome P450 AT3G48520 48.708 7.73e-158 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211477g00030 K20769 K13407 gmx:100817669 658.292