Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211477g00029 ATGATTCAAAACATTATCTTGTTACTCTTTTTCTTCCTTCTTCCCTTACTTTTATTCTTCTTAATCAAACCTTCTTCTTCTTCTTCAAACATCCCAAAATCATACCCAATCATCGGCTCATACTTGTCACTCAGGGCCAACGCCCACCGCCGCATCCAGTGGCTCTCCGACGTGGTCCGTGCCTCCCCTGGCGCCACCTTCACCTTCCGCCGTGTCTTGGGCACCAAGTCCATCATCACCGCTAACCCAGCCAACGTGCAGCACATCCTCAAGAACAACTTCCCCAATTACCGAAAAGGCTCTATCTTCGTCGGAACACTCTCCGATTTCCTCGGCAACGGAATATTCAACACCAACGGCGAGGACTGGAAGTTCCAGAGACAAGTCGCCAGCCACGAGTTCAACACGAAATCCCTCCGCAACTTCGTGGAGAACGTGGTGGACACAGAACTCTCCGATCGACTCCTCCCCATCCTGTCCGGCGCAGCCGCAAACCAAGAACAAACCCTGGATTTGCAAGATATCCTTCAGAGATTCGCCTTTGACAACATCTGCAGAATCGCGTTCGGGTACGACCCTCAGTACCTGAATATATCATTTGAAAGAAGCAACTTCGCTGAGGCATACCAAGAAGCAACCGAGATCAGCAGTTTACGCTTTCGCGAACCCTTACCCTTGCTATGGAAGCTTAAGAGAGCGCTCGACATTGGATCTGAGAAGCGTTTGCGAATTGCTGTATCTCAAGTGCGTGATTCTGCCAACAAACTCGTAAGGGAGAAGAAAAAGGAGCTCCAGGACAACTCATCGCTGAGATCAGCGGACATGCTTTCGCGGTTCTTGAGCTCGGGTCATTCTGACGAGGACTTCGTCACGGACATAGTCATAAGCTTCATTCTCGCCGGAAAGGATACCACCTCGGCGGCCCTCACGTGGTTCTTCTGGCTGCTATCGAAGAACCCTCGTGTGGAGAAGGAGATCGTGAAAGAGATAAACGAGAAATCAGAAGCTCCGGTTTACGATGAAGTGAAGGAGATGGTGTACACGCACGCAGCCTTGTGTGAGAGCATGAGGCTGTACCCTCCGGTTCCCACGGACAGCAAGGAGGCGGTGAACGACGACGTTCTGCCGGACGGGACGGCGGTGAAGAAGGGAATGATGGTGACGTATCATGTTTACGCCATGGGGAGGATGGAAAGCATTTGGGGTCCTGATTGGGCGGAGTTTAGGCCTGAGAGGTGGTTGGAGAGAGTTGAAGGAGGCGGTTCATCGTGGCGGTTCGTGGCGAGGGATTCTTTTAGCTATCCTGTGTTTCAAGCAGGCCCCAGGATTTGCTTGGGGAAGGAAATGGCATTTATGCAGATGAAGAGGGTTGTGGCTGGGGTTCTCAGGAGGTTTAGGGTGGTCCCCGCGGCGGCTGAAGGGGTTGAACCGGAGTTCATTACCTTCCTTACCTCTCAGATGAAAGGTGGTTTTCCTGTTAACATTGTTCAAAGACAAGTTTGA 1503 0.5156 MIQNIILLLFFFLLPLLLFFLIKPSSSSSNIPKSYPIIGSYLSLRANAHRRIQWLSDVVRASPGATFTFRRVLGTKSIITANPANVQHILKNNFPNYRKGSIFVGTLSDFLGNGIFNTNGEDWKFQRQVASHEFNTKSLRNFVENVVDTELSDRLLPILSGAAANQEQTLDLQDILQRFAFDNICRIAFGYDPQYLNISFERSNFAEAYQEATEISSLRFREPLPLLWKLKRALDIGSEKRLRIAVSQVRDSANKLVREKKKELQDNSSLRSADMLSRFLSSGHSDEDFVTDIVISFILAGKDTTSAALTWFFWLLSKNPRVEKEIVKEINEKSEAPVYDEVKEMVYTHAALCESMRLYPPVPTDSKEAVNDDVLPDGTAVKKGMMVTYHVYAMGRMESIWGPDWAEFRPERWLERVEGGGSSWRFVARDSFSYPVFQAGPRICLGKEMAFMQMKRVVAGVLRRFRVVPAAAEGVEPEFITFLTSQMKGGFPVNIVQRQV 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211477g00029 500 CDD CYP86A 66 491 - -
Stsc211477g00029 500 Pfam Cytochrome P450 32 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211477g00029 500 PRINTS E-class P450 group IV signature 444 462 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211477g00029 500 PRINTS E-class P450 group IV signature 291 317 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211477g00029 500 PRINTS E-class P450 group IV signature 345 361 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211477g00029 500 PRINTS E-class P450 group IV signature 396 414 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211477g00029 500 PANTHER CYTOCHROME P450 20 493 - -
Stsc211477g00029 500 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211477g00029 500 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211477g00029 500 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211477g00029 500 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211477g00029 500 Gene3D Cytochrome P450 25 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211477g00029 500 SUPERFAMILY Cytochrome P450 32 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211477g00029 Stsc-Chr211477 120113 121894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211477g00029 1 499 Cytochrome P450 AT5G63450 48.330 2.92e-163 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211477g00029 K20769 K13407 gmx:100795308 722.235