Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211477g00022 ATGGAGGAAGTTGAAGAAGCTAACAGAGTTGCTGTTGAGAGCTGCCACAGAGTTCTAACAATGTTGTCTCAGCCTCAGGATGAGGTTCATTATAGGAATTTAATGGTGAAAAGTGGTGAAGCTGTGATGAGGTTCAAGAAAGTTGTTTCCTTGCTCAGTGATAGTTTGGGTCATGCAAGAATTAGGAAGCATAAGAAGCTTCAAGTACCATTTTCCCAAAGCATCCTCTTGGAAAGCTCAATTTGCATAAGGAACAATGACCAATCTAAGTATTTGAAATTTGCTCAGGGTGATAATTCAGCTCAGGAATTGGGTTTAACAGTCAGGAATTGGCAATGTCTTGCTGTGAAACCGGCCTTGGAATTGAGCTTTAATGGTAATGGGAAGAGTCCTCTTCAACTTGCTCAACAACTCTCATCAACACACCATCATATTCTTCAGCAGCAGCAGCAACAACAAAGGGCATTGCTGCATCAGCAACAAATGAAACATCAAGTGGAAATCATGTTCCAAAGGAACAACATTAACATAAACAATAGCAACAACAAGAGTGTCATAAATCTGAATTTTGACAATAGTTCTAGCTGCACGCCAACAATGTCGTCTACTAGGTCTTTTATGTCTTCCCTTAGCATAGATGGGAGCGTGGCGAACATGGAAGGAAGCGCCTTCCATCTAATCGGAGCTGCAGGCTCATCTGATCAGCATAAGAGAAAATGTTCTGCTAGAGGGGATGAGGGGAGCAGTGCTACTGCAAAATGTCATTGCTCAAAGAAGAGGAAACATAGAGTGAAGAGATCAATCAAGGTGCCTGCTATCAGCAACAAACTTGCAGATATCCCCCCTGATGATTATTCATGGAGGAAGTACGGGCAGAAGCCCATCAAGGGGTCTCCACACCCCAGGGGGTATTATAAGTGCAGCAGCATGAGAGGGTGCCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGAAGAGCCTTCCATGCTAATAGTTACCTATGAAGGGGATCACAACCACCCTAAATTATTAACACAATCTGCAAATGCATGA 1050 0.4333 MEEVEEANRVAVESCHRVLTMLSQPQDEVHYRNLMVKSGEAVMRFKKVVSLLSDSLGHARIRKHKKLQVPFSQSILLESSICIRNNDQSKYLKFAQGDNSAQELGLTVRNWQCLAVKPALELSFNGNGKSPLQLAQQLSSTHHHILQQQQQQQRALLHQQQMKHQVEIMFQRNNININNSNNKSVINLNFDNSSSCTPTMSSTRSFMSSLSIDGSVANMEGSAFHLIGAAGSSDQHKRKCSARGDEGSSATAKCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGDHNHPKLLTQSANA 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211477g00022 349 Pfam WRKY DNA -binding domain 283 340 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211477g00022 349 FunFam WRKY transcription factor 65 265 342 - -
Stsc211477g00022 349 SUPERFAMILY WRKY DNA-binding domain 279 340 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc211477g00022 349 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 345 IPR044810 GO:0003700
Stsc211477g00022 349 Pfam Plant zinc cluster domain 237 279 IPR018872 -
Stsc211477g00022 349 SMART WRKY_cls 281 341 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211477g00022 349 ProSiteProfiles WRKY domain profile. 276 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211477g00022 349 MobiDBLite consensus disorder prediction 239 258 - -
Stsc211477g00022 349 Gene3D WRKY domain 265 341 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211477g00022 Stsc-Chr211477 97348 98981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211477g00022 1 346 WRKY Transcription Factor Family AT2G30590 50.630 1.03e-110 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc211477g00022 WRKY 7.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211477g00022 - - gmx:100127372 439.113