Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211477g00020 ATGCATGACTTGCCCACTATGCAACAACCTCTTCAAAGAAGCCACCACCATATCCGAATGCCTTCACACCTGAAGTGCATTTATGATAAGATCACAGATGAGGAATTAGAGTGCTGTCCAATATGCAACATTGATTTGGGTTGTGTTCCACTCGAAAAACTAAGGCCAGACCACAGTTTGCAAGATGTAAGGGCCAAAGTTTTTCCCTTAAAGGGAAGAAAGGTGACAAAGACACCTGAACCTGCTGCCCCCTCAGTATCACTACCAGCAAGAAGAAAGGAGAGATCTCTTTCATCCTTGGTGGTCAGCACTCCAAGGGTATCTCAACAAGCAACCATGACAGGAAGAAGAACAAAACCTACAAGAAAGGCTAGTAGTCTGCGATCCTCTAGTTTTTCCATCGAAAAGCCCATTAAAAAAGAGGAAGAAATACTAGAAAATCATCCCGAGAGTTCAAGTTCACCCGACACTTCAAATAAGTTTGCTCAAAATACTGGACAGAGTTCATCCCCTCGTGAAGGCAGTCAATCCTTACCAAATAATGGAACAGTGAATGGTTCCGAATCATGGGATGCAAAATTGGATCTTTGGAAGCCCTTGAATTGTTTAGTAGAAGTTGCAAGTAGGAGCAAATCTTTCAAGTCTAATGGACAAGGGTCCGATGCTAAACCAGAAACCATTCAAGTAAATGAAACTAATTCTCAAGTTCTAAAAACCAAAAAAAAGGAAAATAAACGCAAGGGGAAAACTGAGGATGAAAAGACTAGCACTTGTCCTGTCTCTTCTGATACAGCAAAACCCAATAAATCGCGTAGAGTTCGCCGTAGAAAGGAACCTTCTTTTGGGGAATCAGGCATATTACCCCAAGCTGTGCTGGATTCTAACAGCAGTAAACACCTAAGGACTGGTCCAATTTGGTTCTCCTTAGTAGCTTCTGATAACCAGGAAGGAGACGCACCCTTGCCTCAAATTCCTTCAAGTTATGTGAGAATAAAGGATGGAAGCATACCTGTCTCATTTATCCAAAAATACCTAGTGAAGAAACTAGAGCTGACAAGTGAAGCAGAGGTTGAGATTAAATGTATGGGGCAACCAGTGCTCCCTACGCTGCGGCTACAAAACTTGGTCGAGTTGTGGCTGGATTCTGCGGCCACATCACAGCGAACTCCAGCAACCATTGGGTCATCAGCAAAGGATTTTGTGATGGTCCTGGCATATGCTCGGAAGGTCCCACAATCTTGA 1242 0.4332 MHDLPTMQQPLQRSHHHIRMPSHLKCIYDKITDEELECCPICNIDLGCVPLEKLRPDHSLQDVRAKVFPLKGRKVTKTPEPAAPSVSLPARRKERSLSSLVVSTPRVSQQATMTGRRTKPTRKASSLRSSSFSIEKPIKKEEEILENHPESSSSPDTSNKFAQNTGQSSSPREGSQSLPNNGTVNGSESWDAKLDLWKPLNCLVEVASRSKSFKSNGQGSDAKPETIQVNETNSQVLKTKKKENKRKGKTEDEKTSTCPVSSDTAKPNKSRRVRRRKEPSFGESGILPQAVLDSNSSKHLRTGPIWFSLVASDNQEGDAPLPQIPSSYVRIKDGSIPVSFIQKYLVKKLELTSEAEVEIKCMGQPVLPTLRLQNLVELWLDSAATSQRTPATIGSSAKDFVMVLAYARKVPQS 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211477g00020 413 MobiDBLite consensus disorder prediction 150 186 - -
Stsc211477g00020 413 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 25 409 IPR044807 GO:0004842
Stsc211477g00020 413 MobiDBLite consensus disorder prediction 211 235 - -
Stsc211477g00020 413 MobiDBLite consensus disorder prediction 134 149 - -
Stsc211477g00020 413 MobiDBLite consensus disorder prediction 97 133 - -
Stsc211477g00020 413 MobiDBLite consensus disorder prediction 211 281 - -
Stsc211477g00020 413 MobiDBLite consensus disorder prediction 74 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211477g00020 Stsc-Chr211477 84910 89465 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211477g00020 25 332 C3H Transcription Factor Family AT2G30580 51.447 3.69e-84 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211477g00020 K16277 - gmx:100793731 593.578