Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211477g00018 ATGGAGCTGCAATTGAAGAAAACTGCAGTTTCAAGAAGCTGGATTTTGCTTGAGCAGGATGGCAGTGGAGCCATACTGGATGTGGACAAGTATGCTATCATGCGCATGGTTGATATTCACGCTAGGGACCTTCGAATTCTGGACCCTCTCCTCTCATATCCTTCAACCATTCTTGGCAGAGAGAAAGTCATTGTTCTCAATTTAGAGCACATAAAGGCTATTATCACTGCAGAAAAGGTGTTTCTTAGGGATCCAATGGATGATGATGTTGTGCCAATTGTTGAAGAACTTCGAAGGCGGTTACCCAAATCAACTGGGGATGAAGAACCATGTGAAGGGGAAGATAACGAATTTCCGTTTGAGTTCCGAGCATTAGAAGTTGCATTGGAAGCAATTTGCAGTTTCCTTGATGCAAGAACAATAGAGTTAGAGACTGCTGCTTATCCAGCTTTGGATGAGCTCACTTCCCAGATTAGCAGTCGTAATTTGGATAGAGTGCGGAAACTCAAGAGTGCAATGACAAGGTTGACAAATCGAGTTCAAAAGATAAGAGATGAACTAGAAAACCTACTTGATGATGATGATGACATGGCTGATCTTTACTTGTCAAAAAAGTTGGCTAATTTATCTTCTCCTGCAAGTAGTTTCGGTGCTCCCAACTGGCTTCTTAGCTCCCCAAATCCAGATTCAAAGATTCACAGATCAAGCAAAGCTAGTAGTACAGCAACCTCGCTTCAAGTGGAGAATGATGTTGAGGAGCTTGAAATGTTACTTGAGGCATATTTCACGCAAATCGATGGCACATTGAATAAACTGAACACGTTGCGTGAATATATTGACGACACAGAAGATTACATCAACATACAGCTTGACAGTCACAGAAATCAACTGATTCAGCTGGAGCTGTTCCTTAGCTTGGGGACTGTTTCTCTGTCCATATTTTCATTGGTAGGAGCAATATTTGGTATGAACATTCCATATACATGGAAAGATGGTCACGGATACATGTTTAAATGGGTGGTGATGCTTGGGGGAATGGTTTGTGCATCCTTGTTTTTAAGCATAGTAACTTATGCCCGACGCAAAGGCCTTGTGGGGTCTTGA 1104 0.4212 MELQLKKTAVSRSWILLEQDGSGAILDVDKYAIMRMVDIHARDLRILDPLLSYPSTILGREKVIVLNLEHIKAIITAEKVFLRDPMDDDVVPIVEELRRRLPKSTGDEEPCEGEDNEFPFEFRALEVALEAICSFLDARTIELETAAYPALDELTSQISSRNLDRVRKLKSAMTRLTNRVQKIRDELENLLDDDDDMADLYLSKKLANLSSPASSFGAPNWLLSSPNPDSKIHRSSKASSTATSLQVENDVEELEMLLEAYFTQIDGTLNKLNTLREYIDDTEDYINIQLDSHRNQLIQLELFLSLGTVSLSIFSLVGAIFGMNIPYTWKDGHGYMFKWVVMLGGMVCASLFLSIVTYARRKGLVGS 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211477g00018 367 Gene3D - 2 85 - -
Stsc211477g00018 367 Gene3D Magnesium transport protein CorA, transmembrane region 89 297 - -
Stsc211477g00018 367 FunFam Magnesium transporter MRS2-5 87 297 - -
Stsc211477g00018 367 Coils Coil 166 193 - -
Stsc211477g00018 367 Pfam CorA-like Mg2+ transporter protein 253 353 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Stsc211477g00018 367 CDD Mrs2_Mfm1p-like 14 364 IPR039204 -
Stsc211477g00018 367 FunFam Magnesium transporter MRS2-1 3 85 - -
Stsc211477g00018 367 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 5 365 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211477g00018 Stsc-Chr211477 80313 82934 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211477g00018 3 340 MRS2 Gene Family AT5G64560 71.671 5.78e-155 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211477g00018 K16075 - gmx:100799368 542.347