Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211477g00017 ATGGATGATGATGTTGTGCCAATTGTTGAAGAACTTCGAAGGCGGTTACCCAAATCAACTGGGGATGAAGAACCATGTGAAGGGGAAGATAACGAATTTCCGTTTGAGTTCCGAGCATTAGAAGTTGCATTGGAAGCAATTTGCAGTTTCCTTGATGCAAGAACAATAGAGTTAGAGACTGCTGCTTATCCAGCTTTGGATGAGCTCACTTCCCAGATTAGCAGTCGTAATTTGGATAGAGTGCGGAAACTCAAGAGTGCAATGACAAGGTTGACAAATCGAGTTCAAAAGATAAGAGATGAACTAGAAAACCTACTTGATGATGATGATGACATGGCTGATCTTTACTTGTCAAAAAAGTTGGCTAATTTATCTTCTCCTGCAAGTAGTTTCGGTGCTCCCAACTGGCTTCTTAGCTCCCCAAATCCAGATTCAAAGATTCACAGATCAAGCAAAGCTAGTAGTACAGCAACCTCGCTTCAAGTGGAGAATGATGTTGAGGAGCTTGAAATGTTACTTGAGGCATATTTCACGCAAATCGATGGCACATTGAATAAACTGAACACGTTGCGTGAATATATTGACGACACAGAAGATTACATCAACATACAGCTTGACAGTCACAGAAATCAACTGATTCAGCTGGAGCTGTTCCTTAGCTTGGGGACTGTTTCTCTGTCCATATTTTCATTGGTAGGAGCAATATTTGGTATGAACATTCCATATACATGGAAAGATGGTCACGGATACATGTTTAAATGGGTGGTGATGCTTGGGGGAATGGTTTGTGCATCCTTGTTTTTAAGCATAGTAACTTATGCCCGACGCAAAGGCCTTGTGGGGTCTTGA 849 0.4158 MDDDVVPIVEELRRRLPKSTGDEEPCEGEDNEFPFEFRALEVALEAICSFLDARTIELETAAYPALDELTSQISSRNLDRVRKLKSAMTRLTNRVQKIRDELENLLDDDDDMADLYLSKKLANLSSPASSFGAPNWLLSSPNPDSKIHRSSKASSTATSLQVENDVEELEMLLEAYFTQIDGTLNKLNTLREYIDDTEDYINIQLDSHRNQLIQLELFLSLGTVSLSIFSLVGAIFGMNIPYTWKDGHGYMFKWVVMLGGMVCASLFLSIVTYARRKGLVGS 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211477g00017 282 Gene3D Magnesium transport protein CorA, transmembrane region 5 212 - -
Stsc211477g00017 282 Pfam CorA-like Mg2+ transporter protein 168 268 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Stsc211477g00017 282 Coils Coil 81 108 - -
Stsc211477g00017 282 CDD Mrs2_Mfm1p-like 2 279 IPR039204 -
Stsc211477g00017 282 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 3 280 IPR039204 -
Stsc211477g00017 282 FunFam Magnesium transporter MRS2-5 2 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211477g00017 Stsc-Chr211477 80313 82934 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211477g00017 2 255 MRS2 Gene Family AT5G64560 73.234 4.47e-113 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211477g00017 K16075 - vvi:100246066 410.223