Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211476g00019 ATGGCTGGGATTTGCTGTGGTGTTGTTGGAGAGGGCGAAACAACGGCTCCCATCGAGCCAACCTCACGGCCCTCCAGGCGAAGGAGCTTAGACATGCTTTCTTTGAGGTTAATGACCGACGTGGCTGCGGCCACGCCGCATGACGCTTCTCGGAAACGCCAGAGGATGGATCTCTGCGCAGTTCCCAGAGAGTGCGACAACGCCGTGGAGAATCGCAACTCCTTTGGTGTTGCCGGCCAGAGCAAGAAGGAAGGATCTAACCAGGTGGCTAACCACGAAGACGGCATAGTTTCGGAACCGGAACCGAAACGGTCCAAGGTTCCTTCTCTGTTGAGTATGACAGCGGAAGTTTTGAGAAGTGAGGAGGTTGTTGAAGAGTATCCGAAGTTCGGCGTGACGTCCGTTTGCGGAAGGAGACGAGACATGGAAGATTCAGTTTGTGTGCGTCCTTCTTTCTGCGATGAGAGTCACAGAGGGTTCCATTACTTCGGCGTCTTTGACGGTCACGGTTGCTCACATGTTGCGACGATGTGCAAGGAGAGGCTGCATGATATTGTGAAGGATGAGATCAGAGGAGCGAAGAAGGAAGAACAAGAGTTGGAATGGAAATCGATGATGGGGCAAGGTTTTTCACGCATGGACGACGAGGTACAGAGCTGGAGCCAGGGGAATCACTCCTCCGCCTGCCGCTGCGAGCTTCAGACTCCACACTGCGACGCCGTCGGATCCACCGCCGCCGTCGCCGTCGTCACCCCCGACAAGATCGTCGTCTCTAACTGCGGCGACTCACGCGCAGTCCTCTGCCGTAAGGGCATGGCCATCCCCCTCTCCTCCGATCACAAGCCTGACCGACCCGACGAACTGCTCCGGGTTGAAGCAGCAGGAGGGCGCGTGATCTATTGGGATGTTCCCAGGGTGCTTGGGATGCTAGCCATGTCTAGAGCCATAGGGGATAATTATCTGAAACCGTACGTGATCTCGGAACCGGAGGTTACCGTGACGGAGANNNNNNNNNNAATTATTGCAAGTGATGGTTTGTGGGACGTGGTGTCAAATGACACCGCGTGCGGGGTGGTGCGGATGTGTCTCAAGGCTCAGAAGCCACCGTCGCCGCCGGGGTCACCGTCGGGGAGTGAGGTGGCAGCGGACGGATCCGATAGGGCGTGCTCAGATGCTTCGATTCTGCTGACTAAGTTGGCGCTGGCGAGGCACAGCGAGGATAATGTGAGCGTGGTGGTGGTTGACTTGAGGAGGGAGCGACCACGGTCTGACTCTGATCCGAACAATAACAATGTCGTTAATTGA 1305 0.5594 MAGICCGVVGEGETTAPIEPTSRPSRRRSLDMLSLRLMTDVAAATPHDASRKRQRMDLCAVPRECDNAVENRNSFGVAGQSKKEGSNQVANHEDGIVSEPEPKRSKVPSLLSMTAEVLRSEEVVEEYPKFGVTSVCGRRRDMEDSVCVRPSFCDESHRGFHYFGVFDGHGCSHVATMCKERLHDIVKDEIRGAKKEEQELEWKSMMGQGFSRMDDEVQSWSQGNHSSACRCELQTPHCDAVGSTAAVAVVTPDKIVVSNCGDSRAVLCRKGMAIPLSSDHKPDRPDELLRVEAAGGRVIYWDVPRVLGMLAMSRAIGDNYLKPYVISEPEVTVTEXXXXIIASDGLWDVVSNDTACGVVRMCLKAQKPPSPPGSPSGSEVAADGSDRACSDASILLTKLALARHSEDNVSVVVVDLRRERPRSDSDPNNNNVVN 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211476g00019 434 ProSiteProfiles PPM-type phosphatase domain profile. 129 416 IPR001932 -
Stsc211476g00019 434 MobiDBLite consensus disorder prediction 365 384 - -
Stsc211476g00019 434 ProSitePatterns PPM-type phosphatase domain signature. 162 170 IPR000222 GO:0043169
Stsc211476g00019 434 SUPERFAMILY PP2C-like 126 417 IPR036457 -
Stsc211476g00019 434 Pfam Protein phosphatase 2C 130 393 IPR001932 -
Stsc211476g00019 434 CDD PP2Cc 129 416 IPR001932 -
Stsc211476g00019 434 PANTHER PROTEIN PHOSPHATASE 92 416 IPR015655 GO:0004722|GO:0006470
Stsc211476g00019 434 Gene3D - 123 424 IPR036457 -
Stsc211476g00019 434 FunFam Protein phosphatase 2C 50 155 424 - -
Stsc211476g00019 434 SMART PP2C_4 117 414 IPR001932 -
Stsc211476g00019 434 MobiDBLite consensus disorder prediction 77 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211476g00019 Stsc-Chr211476 180562 182797 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211476g00019 79 418 PP2C-type Phosphatase Gene Family AT2G29380 56.534 4.34e-132 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211476g00019 K14497 - gmx:100776356 512.686