Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211476g00018 ATGGCTGGGATTTGCTGTGGTGTTGTTGGAGAGGGCGAAACAACGGCTCCCATCGAGCCAACCTCACGGCCCTCCAGGCGAAGGAGCTTAGACATGCTTTCTTTGAGGTTAATGACCGACGTGGCTGCGGCCACGCCGCATGACGCTTCTCGGAAACGCCAGAGGATGGATCTCTGCGCAGTTCCCAGAGAGTGCGACAACGCCGTGGAGAATCGCAACTCCTTTGGTGTTGCCGGCCAGAGCAAGAAGGAAGGATCTAACCAGGTGGCTAACCACGAAGACGGCATAGTTTCGGAACCGGAACCGAAACGGTCCAAGGTTCCTTCTCTGTTGAGTATGACAGCGGAAGTTTTGAGAAGTGAGGAGGTTGTTGAAGAGTATCCGAAGTTCGGCGTGACGTCCGTTTGCGGAAGGAGACGAGACATGGAAGATTCAGTTTGTGTGCGTCCTTCTTTCTGCGATGAGAGTCACAGAGGGTTCCATTACTTCGGCGTCTTTGACGGTCACGGTTGCTCACATGTTGCGACGATGTGCAAGGAGAGGCTGCATGATATTGTGAAGGATGAGATCAGAGGAGCGAAGAAGGAAGAACAAGAGTTGGAATGGAAATCGATGATGGGGCAAGGTTTTTCACGCATGGACGACGAGGTACAGAGCTGGAGCCAGGGGAATCACTCCTCCGCCTGCCGCTGCGAGCTTCAGACTCCACACTGCGACGCCGTCGGATCCACCGCCGCCGTCGCCGTCGTCACCCCCGACAAGATCGTCGTCTCTAACTGCGGCGACTCACGCGCAGTCCTCTGCCGTAAGGGCATGGCCATCCCCCTCTCCTCCGATCACAAGCCTGACCGACCCGACGAACTGCTCCGGGTTGAAGCAGCAGGAGGGCGCGTGATCTATTGGGATGTTCCCAGGGTGCTTGGGATGCTAGCCATGTCTAGAGCCATAGGTGAGTGTCGAGCAACAACTGCGCACGTTAGCACCATGTGCTAA 993 0.5629 MAGICCGVVGEGETTAPIEPTSRPSRRRSLDMLSLRLMTDVAAATPHDASRKRQRMDLCAVPRECDNAVENRNSFGVAGQSKKEGSNQVANHEDGIVSEPEPKRSKVPSLLSMTAEVLRSEEVVEEYPKFGVTSVCGRRRDMEDSVCVRPSFCDESHRGFHYFGVFDGHGCSHVATMCKERLHDIVKDEIRGAKKEEQELEWKSMMGQGFSRMDDEVQSWSQGNHSSACRCELQTPHCDAVGSTAAVAVVTPDKIVVSNCGDSRAVLCRKGMAIPLSSDHKPDRPDELLRVEAAGGRVIYWDVPRVLGMLAMSRAIGECRATTAHVSTMC 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211476g00018 330 CDD PP2Cc 129 317 IPR001932 -
Stsc211476g00018 330 ProSitePatterns PPM-type phosphatase domain signature. 162 170 IPR000222 GO:0043169
Stsc211476g00018 330 MobiDBLite consensus disorder prediction 77 107 - -
Stsc211476g00018 330 Gene3D - 123 328 IPR036457 -
Stsc211476g00018 330 PANTHER PROTEIN PHOSPHATASE 91 318 IPR015655 GO:0004722|GO:0006470
Stsc211476g00018 330 Pfam Protein phosphatase 2C 130 319 IPR001932 -
Stsc211476g00018 330 ProSiteProfiles PPM-type phosphatase domain profile. 129 330 IPR001932 -
Stsc211476g00018 330 SMART PP2C_4 117 326 IPR001932 -
Stsc211476g00018 330 SUPERFAMILY PP2C-like 126 320 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211476g00018 Stsc-Chr211476 180562 182797 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211476g00018 1 318 PP2C-type Phosphatase Gene Family AT3G11410 50.303 3.30e-103 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211476g00018 K14497 - gmx:100796161 366.696