Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211476g00007 ATGGAGGAAAGTCATGATGAGTACTTGATGTGGATGAAGAGGAAACAAATCTTGAAGTCACATATTCAAGTAGCACCCTTTATTGGAGGTAGCAGCAATTCATCATCAACAACATCAACATGGGAAGAAAGGGCATTTGCTGAAGATGCTGCAAGGATTCTAGGTGGATGCATATGGCCTCCAAGATCATACTCATGCAGCTTCTGCAAAAGGGAATTCAGGTCTGCTCAAGCTCTTGGGGGACACATGAATGTTCATAGGAGGGACAGAGCTAGGCTCAAAAGAAGCCTTAGCCCTCATCATCATCATCATCATACCAAAAATGATTGTAAGTCATCATCATTATTATTAGGTACTTCTTCTTCTCATCATCATCATCATCACAATCAATCTTCTGGGGAGAATTACTACCACTACTACTCTAGTAGCCTTATTAATGGAACTACTGATAATAATAATAAAGTTATTACAAGAAGTAGCAAACCTTCGTCATCTGATTCAGAACCAAAAGAAGGGAAAGTCAATGCAATAACAACAAATAGTTATTGTGATTATGTTGAAACAAGTTTGTGTGTGGGGATGCATAACTCATTATGTGGGGACGAAGAAGAATGTTATTATAAAAGGACAAAGAGGACAAATAATTCTTCAGTGTTTTGTTCTACTTCATGTTCAAATGATAGAAGGCTGCAGGTGGGTTTGCAGTCTGCAGAATCATTTGCAGTACCTACTGGAACTGGAATGGAAGATTTGGATCTTGAACTCAGGCTGGGGAAACCGCAGAAAGTTTGA 792 0.3902 MEESHDEYLMWMKRKQILKSHIQVAPFIGGSSNSSSTTSTWEERAFAEDAARILGGCIWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKRSLSPHHHHHHTKNDCKSSSLLLGTSSSHHHHHHNQSSGENYYHYYSSSLINGTTDNNNKVITRSSKPSSSDSEPKEGKVNAITTNSYCDYVETSLCVGMHNSLCGDEEECYYKRTKRTNNSSVFCSTSCSNDRRLQVGLQSAESFAVPTGTGMEDLDLELRLGKPQKV 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211476g00007 263 SMART c2h2final6 64 86 IPR013087 -
Stsc211476g00007 263 SUPERFAMILY beta-beta-alpha zinc fingers 61 91 IPR036236 -
Stsc211476g00007 263 PANTHER OS07G0101800 PROTEIN 20 261 - -
Stsc211476g00007 263 Pfam C2H2-type zinc finger 64 88 - -
Stsc211476g00007 263 ProSitePatterns Zinc finger C2H2 type domain signature. 66 86 IPR013087 -
Stsc211476g00007 263 ProSiteProfiles Zinc finger C2H2 type domain profile. 64 91 IPR013087 -
Stsc211476g00007 263 MobiDBLite consensus disorder prediction 150 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211476g00007 Stsc-Chr211476 58533 59464 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211476g00007 12 121 C2H2 Transcription Factor Family AT5G06070 52.174 6.04e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211476g00007 - - gmx:102663477 202.216