Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211476g00003 ATGAAAGGGTTTGGGTGTTCTTGTGGAGCATGCAAGTACCTAAGGAGAAGGTGCACAAGAGATTGTATATTTGCACCTTACTTCTCCTACGAGGAGGCATCAACCCATTTTGCGGCGGTTCATAAGGTGTTTGGTGCTAGCAACGTCTCTAGGCTGTTGCTACACCTTCCATTGCACCACAGAAGTGACGCTGCTATCACCATTTCTTTCCAAGCTCTCGCTCGCATCCACGATCCTATCTACGGTTGTCTTTCTTATATCTATCTATTGCAGCAACAGGTTGCAAGCTTGCATAGGGAGATAGATGATATACTAAGGAACAATTTCATGATGAAGAGTTATTCATGTTTTGGTTTTGAGAATTATTATGGCAGTGTTATGAACACCAACAACGGGATAGAGGATATTATTGTGCAAGAAGGCAGTGACGAAGAAAGTGGTAGCAGAGACAGAGAGTATTATCAAAGCTTATTATCTATGGAGGCAAATAATAATGATGAATTCTTTGAAGAGCATAATTTATTATATGGTGATCAGACAGACCCCATCTCTCTGGACAAGTTTCTATCTGGAATTGACCAGGATGTGTTCCTTAATCATCCATGGTTCAAGCACAATAATAATAATAATGCTACATGA 639 0.4038 MKGFGCSCGACKYLRRRCTRDCIFAPYFSYEEASTHFAAVHKVFGASNVSRLLLHLPLHHRSDAAITISFQALARIHDPIYGCLSYIYLLQQQVASLHREIDDILRNNFMMKSYSCFGFENYYGSVMNTNNGIEDIIVQEGSDEESGSRDREYYQSLLSMEANNNDEFFEEHNLLYGDQTDPISLDKFLSGIDQDVFLNHPWFKHNNNNNAT 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211476g00003 212 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Stsc211476g00003 212 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 118 - -
Stsc211476g00003 212 Pfam Lateral organ boundaries (LOB) domain 7 102 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211476g00003 Stsc-Chr211476 28959 30863 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211476g00003 1 128 AS2 family AT5G06080 57.812 9.43e-51 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc211476g00003 LOB 3.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211476g00003 K13945 - gmx:100787638 190.274